G104870


Basic Information

Item Value
gene id G104870
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 1208686 ~ 1210405 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU118015
CTACCAGACCTGTAGGGCCCAGACCCTCTCTACCAGACCTGTAGGGCCCAGTCACTCTCTACCAGAACTGTAGGGCCCAgacactctctacctctctaccagaCCTGTAGGGCCCAGACGCTCTCTACCAGACCTGTAGGGCCCAGACCCTCTCTACCAGACCTGTAGggcccagtccctctctacctctctagctGACTACATCAGTACTACAGCTGACTACATCAGTACTACAGCTGACTACATCAATACTACAGCAGACTACATCAGTAATACAGTTGACTACAACAATACTACAGTTGACTACATCAATACTACCGCCGACTGAATCAATACTGCAGCTGACTACATCAATACTACAGCTGACTACATAAATACTACAGCAGACTACATCAATACTACAGCAGACTACATCAATACTACAGCTGACTACATCAATACTACAGCAGACTACATCAATACTACAGCAGACTACATCAGTACTACAGCTGACTACATCAATACTACAGCTGACTACAACAGTACTACAGCAGACTACATCAGTACTACAGCAGACTACATCAGTACTACAGCAGACTACATCAGTACTACAGCAGACTACATCAGTACTACAGCAGACTACATCAGTACTACAGCTGACTACATCAGTACTACATCAGTACTACAGCAGACTAGATCAATACTACAGCAGACTACATCAATACTACAGCAGACTAGATCAGTACTACAGCAGACTACATCAAGACTACATCAATACTACAGCAGACTACATCAGTACTACAGCTGACTACAACAGTACTACAGCAGACTACATCAGTACTACAGCAGACTACATCAGTACTACATCAGTACTACATCAGTACTACAGCAGACTAGATCAATACTACAGCAGACTACATCAGTACTACAGCAGACTACATCAGTACTACAGCAGACTACATCAGTACTACAGCTGACTACAACAATACTACAGCAGACTACATCAGTACTACAGCAGACTACATCAGTACTACATCAGTACTACATCAGTACTACAGCAGACTAGATCAATACTACAGCAGACTACATCAGTACTACAGCAGACTAGATCAATACTACAGCTGACTACATCAGTACTACAGCAGACTACATCAGTACTAGAGCAGACTACATCAGTACTACAGCTGACTACAACAGTACTACAGCAGACTACATCAGTACTACAGCAGACTACATCAGTACTACAGCTGACTACATCAGTACTACAGCAGACTACATCAATACTACATCAATACTACATCAACTACATCAATACTACAGCTGACTACATCAGTACTAAAGC

Function

NR:

description
mucin-1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU118015 True 1321 lncRNA 0.39 4 1208686 1210405

Neighbor

gene id symbol gene type direction distance location
azi2 azi2 coding downstream 303268 879818 ~ 905418 (-)
eomesb eomesb coding downstream 395496 806150 ~ 813190 (-)
LOC110516483 LOC106573240 coding downstream 417815 727654 ~ 790871 (-)
LOC118937315 NA coding downstream 532174 672497 ~ 676512 (-)
LOC118937314 NA coding downstream 700617 423319 ~ 508560 (-)
LOC118937319 NA coding upstream 105259 1314565 ~ 1316245 (-)
LOC110515934 gadl1 coding upstream 216846 1427251 ~ 1457133 (-)
LOC110515405 LOC106590999 coding upstream 362997 1573402 ~ 1683489 (-)
kiaa1143 k1143 coding upstream 492546 1702951 ~ 1704863 (-)
zdhhc3a zdhhc3 coding upstream 499111 1709516 ~ 1732333 (-)
G104863 NA non-coding downstream 33908 1173334 ~ 1174778 (-)
G104857 NA non-coding downstream 49192 1158979 ~ 1159494 (-)
G104842 NA non-coding downstream 82029 1118703 ~ 1126657 (-)
G104838 NA non-coding downstream 97399 1110028 ~ 1111287 (-)
G104827 NA non-coding downstream 134809 1072864 ~ 1073877 (-)
G104871 NA non-coding upstream 631 1211036 ~ 1212353 (-)
G104872 NA non-coding upstream 6546 1216951 ~ 1217640 (-)
G104877 NA non-coding upstream 19349 1229754 ~ 1230759 (-)
G104878 NA non-coding upstream 22602 1233007 ~ 1234595 (-)
G104865 NA non-coding upstream 39058 1249463 ~ 1249910 (-)
G105220 NA other upstream 123581 1333986 ~ 1342335 (-)
G105285 NA other upstream 330325 1540730 ~ 1541706 (-)
G105340 NA other upstream 430862 1641267 ~ 1641732 (-)
G105427 NA other upstream 702187 1912592 ~ 1917188 (-)

Expression


Co-expression Network