G104890



Basic Information


Item Value
gene id G104890
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 1257807 ~ 1258074 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU118045
CACTCTACCCTTTTGGTCACTCGACTAAGCATTTCTcaccttaatgtcaatatgccttgtccattgctgttctggttagtgtttattggcttatttcactgtagagcctctagtcctgctcactataccttatccaacctattagttccaccgcccacacatgcgatgacatctcctggtttcaatgatgtttctagagacaatatctctctcttcatcactcaatacctaggtttacctccactgtattcacatcctaccttacctt

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU118045 True 268 lncRNA 0.47 1 1257807 1258074

Neighbor


gene id symbol gene type direction distance location
azi2 azi2 coding downstream 352389 879818 ~ 905418 (-)
eomesb eomesb coding downstream 444617 806150 ~ 813190 (-)
LOC110516483 LOC106573240 coding downstream 466936 727654 ~ 790871 (-)
LOC118937315 NA coding downstream 581295 672497 ~ 676512 (-)
LOC118937314 NA coding downstream 749738 423319 ~ 508560 (-)
LOC118937319 NA coding upstream 57590 1314565 ~ 1316245 (-)
LOC110515934 gadl1 coding upstream 169177 1427251 ~ 1457133 (-)
LOC110515405 LOC106590999 coding upstream 315328 1573402 ~ 1683489 (-)
kiaa1143 k1143 coding upstream 444877 1702951 ~ 1704863 (-)
zdhhc3a zdhhc3 coding upstream 451442 1709516 ~ 1732333 (-)
G104887 NA non-coding downstream 3754 1252769 ~ 1254053 (-)
G104865 NA non-coding downstream 7897 1249463 ~ 1249910 (-)
G104878 NA non-coding downstream 23212 1233007 ~ 1234595 (-)
G104877 NA non-coding downstream 27048 1229754 ~ 1230759 (-)
G104872 NA non-coding downstream 40167 1216951 ~ 1217640 (-)
G104892 NA non-coding upstream 6353 1264427 ~ 1265429 (-)
G104898 NA non-coding upstream 19582 1277656 ~ 1278166 (-)
G105197 NA non-coding upstream 40296 1298370 ~ 1298646 (-)
G105200 NA non-coding upstream 46438 1304512 ~ 1304743 (-)
G105220 NA other upstream 75912 1333986 ~ 1342335 (-)
G105285 NA other upstream 282656 1540730 ~ 1541706 (-)
G105340 NA other upstream 383193 1641267 ~ 1641732 (-)
G105427 NA other upstream 654518 1912592 ~ 1917188 (-)

Expression



Co-expression Network