G104798


Basic Information

Item Value
gene id G104798
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 1266456 ~ 1267051 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU117889
GTCTGAGGTATCTGGGAGTTTAGATGTGTTGAGTCTGAGGTATCTGGGAGTTTAGATGTGTTGAGTCTGAGGTATCTGAGAGTATAGATGTGTTGAGCCTGAGGTATCTGGGAGTTTAGATGTGTTGAGTCTGAGGTATCTGAGAGTATAGATGTGTTGTGTTTTGAGTCTGAGGTATCTGGGAGTTTAGATGGGTTGTTTGTTGAGCTGGAGTTATCTGGGAGCCATAAAATATAATTTTAGCCAGG
>TU117890
GTTGTGTGTTGAGTCTGAGGTATCTGGGAGTTTAGATGTGTTGAGTCTGAGGTATCTGGGAGTTTAGATGGGTTGTGTGTTGAGCCTGAGGTATCTGGGAGTTTAGATGTGTTGAGTCTGAGGTATCTGAGAGTATAGATGTGTTGTGTTTTGAGTCTGAGGTATCTGGGAGTTTAGATGGGTTGTTTGTTGAGCTGGAGTTATCTGGGAGCCATAAAATATAATTTTAGCCAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU117889 False 248 lncRNA 0.53 3 1266456 1267051
TU117890 True 235 lncRNA 0.43 2 1266650 1267051

Neighbor

gene id symbol gene type direction distance location
rbms3 rbms3 coding upstream 34921 1023461 ~ 1231535 (+)
LOC110515032 LOC106606177 coding upstream 41552 1222130 ~ 1224904 (+)
LOC118936923 NA coding upstream 296928 968616 ~ 969528 (+)
LOC110506977 LOC106595099 coding upstream 357880 905576 ~ 908576 (+)
cmc1 cc068 coding upstream 393942 860459 ~ 872515 (+)
tgfbr2b LOC106606173 coding downstream 42151 1309202 ~ 1390936 (+)
LOC118937323 NA coding downstream 157265 1424316 ~ 1426453 (+)
stt3b stt3b coding downstream 189285 1456336 ~ 1564305 (+)
LOC118937324 NA coding downstream 303259 1570310 ~ 1573421 (+)
LOC118937327 NA coding downstream 321131 1585657 ~ 1588650 (+)
G104789 NA non-coding upstream 13989 1250221 ~ 1252467 (+)
G104702 NA non-coding upstream 32323 1233525 ~ 1234133 (+)
G104776 NA non-coding upstream 82738 1182336 ~ 1183718 (+)
G104771 NA non-coding upstream 92397 1173655 ~ 1174059 (+)
G104770 NA non-coding upstream 92928 1172408 ~ 1173528 (+)
G104894 NA non-coding downstream 5046 1272097 ~ 1272610 (+)
G104896 NA non-coding downstream 8981 1276032 ~ 1276273 (+)
G104911 NA non-coding downstream 35377 1302428 ~ 1303051 (+)
G104912 NA non-coding downstream 36585 1303636 ~ 1303911 (+)
G104913 NA non-coding downstream 38193 1305244 ~ 1305543 (+)
G104761 NA other upstream 112707 1153061 ~ 1153749 (+)
G104092 NA other upstream 565185 690046 ~ 701271 (+)
G103851 NA other upstream 1085434 174996 ~ 181022 (+)
G105036 NA other downstream 432022 1699073 ~ 1700431 (+)
G105042 NA other downstream 441918 1708969 ~ 1710557 (+)
G106019 NA other downstream 1253665 2520716 ~ 2527972 (+)
G106122 NA other downstream 1450910 2717961 ~ 2718525 (+)

Expression


Co-expression Network