G104896


Basic Information

Item Value
gene id G104896
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 1276032 ~ 1276273 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU118052
GGGTCTGGTCAGGAACCTGCCTGGTATACAACGAAACCACTTCAGAACCACAGCAGCCATCTCCCTACTATCTCCTTAATatctccctcccatctccctaCTATCTCCATAACATCTATCTACTATCTCTCTACCATCTCCGTACCATCTATCTACTATCTCCCTACCATCTCCCTACTATCTCTCTACAATATCCCTACTATCTCGGTGTCCTGtctaaattcccaagctgtccctcatac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU118052 True 242 lncRNA 0.53 1 1276032 1276273

Neighbor

gene id symbol gene type direction distance location
rbms3 rbms3 coding upstream 44497 1023461 ~ 1231535 (+)
LOC110515032 LOC106606177 coding upstream 51128 1222130 ~ 1224904 (+)
LOC118936923 NA coding upstream 306504 968616 ~ 969528 (+)
LOC110506977 LOC106595099 coding upstream 367456 905576 ~ 908576 (+)
cmc1 cc068 coding upstream 403518 860459 ~ 872515 (+)
tgfbr2b LOC106606173 coding downstream 32929 1309202 ~ 1390936 (+)
LOC118937323 NA coding downstream 148043 1424316 ~ 1426453 (+)
stt3b stt3b coding downstream 180063 1456336 ~ 1564305 (+)
LOC118937324 NA coding downstream 294037 1570310 ~ 1573421 (+)
LOC118937327 NA coding downstream 311909 1585657 ~ 1588650 (+)
G104894 NA non-coding upstream 3422 1272097 ~ 1272610 (+)
G104798 NA non-coding upstream 8981 1266456 ~ 1267051 (+)
G104789 NA non-coding upstream 23565 1250221 ~ 1252467 (+)
G104702 NA non-coding upstream 41899 1233525 ~ 1234133 (+)
G104776 NA non-coding upstream 92314 1182336 ~ 1183718 (+)
G104911 NA non-coding downstream 26155 1302428 ~ 1303051 (+)
G104912 NA non-coding downstream 27363 1303636 ~ 1303911 (+)
G104913 NA non-coding downstream 28971 1305244 ~ 1305543 (+)
G104914 NA non-coding downstream 30885 1307158 ~ 1308007 (+)
G104921 NA non-coding downstream 57713 1333986 ~ 1342332 (+)
G104761 NA other upstream 122283 1153061 ~ 1153749 (+)
G104092 NA other upstream 574761 690046 ~ 701271 (+)
G103851 NA other upstream 1095010 174996 ~ 181022 (+)
G105036 NA other downstream 422800 1699073 ~ 1700431 (+)
G105042 NA other downstream 432696 1708969 ~ 1710557 (+)
G106019 NA other downstream 1244443 2520716 ~ 2527972 (+)
G106122 NA other downstream 1441688 2717961 ~ 2718525 (+)

Expression


Co-expression Network