G105205


Basic Information

Item Value
gene id G105205
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 1377083 ~ 1390929 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU118525
TaaatacagaaatactttattCATAAAACAGATTTACAATATCTTACAAATACAAAGGATAAAATATATTTGTCTAGATCCTGTTAAATGTGTTATTTAGACAGAGTGTGTGAAATGCTCCTCTGCTTCCACAACAACATCTAGAGTGGAGATTATTTTCTGTACAGCTACATTCCATATATATTTACAATGTGCTTGTTTATTTGGCTAACAAGTAAAAACTATTACTATGTAAAAAAAacacacacacacacacacacacacacac
>TU118527
AGTGTGTGAAATGCTCCTCTGCTTCCACAACAACATCTAGAGTGGAGATTATTTTCTGTACAGCTACATTCCATATATATTTACAATGTGCTTGTTTATTTGGCTAACAAGTAAAAACTATTACTATGTAAAAAcacacacacacacacacacacacacacacacacacagacacactgtacaTACAATCCTTGTGTGAATAGAGCTCCACGTCATTATAATTTCTGTTACAATATGGCTCGTTATTACATTATTACACAGACCTGTCAATTCATTACCCCACATGTTAGAATACAGGAACATTACCCAACTCCCTCAACATGTTAGAATACATTACCCCACTCCCCCAACATGTTAGAATTCATTACCCCACACCCCCAACATGTTAGAATACAGGAACATTACCCAACTCCCTCAACATTCTAGAATACATTACCCCACTCCCCCCACATGTTAGAATAGTCTTTGGTTATAAACTATTCCAATGTCATGTCCTATAATCTCAGTCTTTGGTTATAAACTCTTCCATTGCCATGTCCTGTAATCTCAGTCTTTGGTTATAATCTCTGCCATTGTCATGTCCTGTAATCTCAGTCTTTGGTTATAATCTTTTCCATTGTCATGTCCTGTAATCTCAGTCTTTGGTTATAATCTCTGCCATTGTCATGTCCTGTAATCTCAGTCTTTGGTTATAATCTCTCCCATTGTCATGTCCTGTAATCTCAGTCTTTGGTAATACTATTTTCCATTGTCATGTCCTGTAATCTCAGTCTTTGGTTATAAACTCTTCCATTGTCATGTCCTGTAATCTCAGTCTTTGGTTATAATCTCTGCCATTGTCATGTCCTGTAATCTCAGTCTTTGGTAATAATCTGTTCCATTGTCATGTCCTGTAATCTTAGTCTTTGGTTATAAACTCTTCCATTGTCATGTCCTGTAATCTCAGTCTTTGGTTATAATCTCTGCCATTGTCATGTCCTGTAATCTCAGTCTTTGGTTATAATCTCTCCCATTGTCATGTCCTGTAATCTCAGTCTTTGGTAATACTATTTTCCATTGTCATGTCCTGTAATCTCAGTCTTTGGTTATAAACTCTTCCATTGTCATGTCCTGTAATCTCAGTCTTTGGTTATAATCTCTGCCATTGTCATGTCCTGTAATCTCAGTCTTTGGTTATAATCTCTGCCATTGTCATGTCCTGTAATCTCAGTCTTTGGTTATAAACTCTTCCATTGTCATGTCCTGTAATCTCAGTCTTTGGTTATAATCTCTGCCATTGTCATGTCCTGTAATCTCAGTCTTTGGTTATAATCTCTTCCATTGTCATGTCCTGTAATCTCAGTCTTTGGTTATAATCTCTTCCATTGTCATGTCCTGTAATCTCAGTCTTTGGTTATAATCTCTGCCATTGTCATGTCCTGTAATCTCAGTCTTTGGTTATAATCTCTGCGA
>TU118530
TaaatacagaaatactttattCATAAAACAGATTTACAATATCTTACAAATACAAAGGATAAAATATATTTGTCTAGATCCTGTTAAATGTGTTATTTAGACAGAGTGTGTGAAATGCTCCTCTGCTTCCACAACAACATCTAGAGTGGAGATTATTTTCTGTACAGCTACATTCCATATATATTTACAATGTGCTTGTTTATTTGGCTAACAAGTAAAAACTATTACTATGTAAAAAcacacacacacacacacacacacacacacacacacacagacacactgtacaTACAATCCTTGTGTGAATAGAGCTCCACGTCATTATAATTTCTGTTACAATATGGCTCGTTATTACATTATTACACAGACCTGTCAATTCATTACCCCACATGTTAGAATACAGGAACATTACCCAACTCCCTCAACATGTTAGAATACATTACCCCACTCCCCCAACATGTTAGAATTCATTACCCCACACCCCCAACATGTTAGAATACAGGAACATTACCCAACTCCCTCAACATTCTAGAATACATTACCCCACTCCCCCCACATGTTAGAATAGTCTTTGGTTATAAACTATTCCAATGTCATGTCCTATAATCTCAGTCTTTGGTTATAAACTCTTCCATTGCCATGTCCTGTAATCTCAGTCTTTGGTTATAATCTCTGCCATTGTCATGTCCTGTAATCTCAGTCTTTGGTTATAATCTTTTCCATTGTCATGTCCTGTAATCTCAGTCTTTGGTTATAATCTCTGCCATTGTCATGTCCTGTAATCTCAGTCTTTGGTTATAATCTCTCCCATTGTCATGTCCTGTAATCTCAGTCTTTGGTAATACTATTTTCCATTGTCATGTCCTGTAATCTCAGTCTTTGGTTATAAACTCTTCCATTGTCATGTCCTGTAATCTCAGTCTTTGGTTATAATCTCTGCCATTGTCATGTCCTGTAATCTCAGTCTTTGGTAATAATCTGTTCCATTGTCATGTCCTGTAATCTTAGTCTTTGGTTATAAACTCTTCCATTGTCATGTCCTGTAATCTCAGTCTTTGGTTATAATCTCTGCCATTGTCATGTCCTGTAATCTCAGTCTTTGGTTATAATCTCTCCCATTGTCATGTCCTGTAATCTCAGTCTTTGGTAATACTATTTTCCATTGTCATGTCCTGTAATCTCAGTCTTTGGTTATAAACTCTTCCATTGTCATGTCCTGTAATCTCAGTCTTTGGTTATAATCTCTGCCATTGTCATGTCCTGTAATCTCAGTCTTTGGTTATAATCTCTGCCATTGTCATGTCCTGTAATCTCAGTCTTTGGTTATAAACTCTTCCATTGTCATGTCCTGTAATCTCAGTCTTTGGTTATAATCTCTGCCATTGTCATGTCCTGTAATCTCAGTCTTTGGTTATAATCTCTTCCATTGTCATGTCCTGTAATCTCAGTCTTTGGTTATAATCTCTTCCATTGTCATGTCCTGTAATCTCAGTCTTTGGTTATAATCTCTGCCATTGTCATGTCCTGTAATCTCAGTCTTTGGTTATAATCTCTGCGA

Function

NR:

description
PREDICTED: centromere-associated protein E

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU118525 False 268 lncRNA 0.45 2 1377083 1390929
TU118527 False 1452 lncRNA 0.42 2 1389346 1390825
TU118530 True 1558 lncRNA 0.41 2 1389346 1390929

Neighbor

gene id symbol gene type direction distance location
LOC118937319 NA coding downstream 60838 1314565 ~ 1316245 (-)
azi2 azi2 coding downstream 471665 879818 ~ 905418 (-)
eomesb eomesb coding downstream 563893 806150 ~ 813190 (-)
LOC110516483 LOC106573240 coding downstream 586212 727654 ~ 790871 (-)
LOC118937315 NA coding downstream 700571 672497 ~ 676512 (-)
LOC110515934 gadl1 coding upstream 36322 1427251 ~ 1457133 (-)
LOC110515405 LOC106590999 coding upstream 182473 1573402 ~ 1683489 (-)
kiaa1143 k1143 coding upstream 312022 1702951 ~ 1704863 (-)
zdhhc3a zdhhc3 coding upstream 318587 1709516 ~ 1732333 (-)
nrsn1 nrsn1 coding upstream 530081 1921010 ~ 1925939 (-)
G105230 NA non-coding downstream 642 1363753 ~ 1376441 (-)
G105231 NA non-coding downstream 5409 1369961 ~ 1371674 (-)
G105200 NA non-coding downstream 72340 1304512 ~ 1304743 (-)
G105197 NA non-coding downstream 78437 1298370 ~ 1298646 (-)
G105244 NA non-coding upstream 7544 1398473 ~ 1402640 (-)
G105257 NA non-coding upstream 45261 1436190 ~ 1438620 (-)
G105271 NA non-coding upstream 81932 1472861 ~ 1474067 (-)
G105294 NA non-coding upstream 96368 1487297 ~ 1490169 (-)
G105299 NA non-coding upstream 111386 1502315 ~ 1502980 (-)
G105220 NA other downstream 34748 1333986 ~ 1342335 (-)
G105285 NA other upstream 149801 1540730 ~ 1541706 (-)
G105340 NA other upstream 250338 1641267 ~ 1641732 (-)
G105427 NA other upstream 521663 1912592 ~ 1917188 (-)
G105428 NA other upstream 526422 1917351 ~ 1918027 (-)

Expression


Co-expression Network