G104942


Basic Information

Item Value
gene id G104942
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 1392633 ~ 1397551 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU118127
tttgttacggtgcgtgaatgaggacccaaaagcgaattaacgtaaacagagcttctttaataacaaaacaaacgtaggctcagatggaccggcagattccgacaggacaggacaaggttgcagcaaacatgacgatagtctggttcaggcatgaataacacaaacaagaatccgacaaagacagaaacaaaaacagagagagatatagaggactaatcagagggaaaaagggaacaggtgggaaaaggggtgacgaggtagttaggaggagaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU118127 True 274 lncRNA 0.52 2 1392633 1397551

Neighbor

gene id symbol gene type direction distance location
tgfbr2b LOC106606173 coding upstream 1697 1309202 ~ 1390936 (+)
rbms3 rbms3 coding upstream 161098 1023461 ~ 1231535 (+)
LOC110515032 LOC106606177 coding upstream 167729 1222130 ~ 1224904 (+)
LOC118936923 NA coding upstream 423105 968616 ~ 969528 (+)
LOC110506977 LOC106595099 coding upstream 484057 905576 ~ 908576 (+)
LOC118937323 NA coding downstream 26765 1424316 ~ 1426453 (+)
stt3b stt3b coding downstream 58785 1456336 ~ 1564305 (+)
LOC118937324 NA coding downstream 172759 1570310 ~ 1573421 (+)
LOC118937327 NA coding downstream 190631 1585657 ~ 1588650 (+)
LOC118937328 NA coding downstream 191269 1588820 ~ 1589368 (+)
G104937 NA non-coding upstream 8314 1383918 ~ 1384319 (+)
G104928 NA non-coding upstream 21677 1370048 ~ 1370956 (+)
G104925 NA non-coding upstream 30793 1361460 ~ 1361840 (+)
G104923 NA non-coding upstream 47178 1344777 ~ 1345455 (+)
G104921 NA non-coding upstream 50301 1333986 ~ 1342332 (+)
G104944 NA non-coding downstream 690 1398241 ~ 1398624 (+)
G104945 NA non-coding downstream 3888 1401439 ~ 1402879 (+)
G104948 NA non-coding downstream 9840 1407391 ~ 1408774 (+)
G104955 NA non-coding downstream 46984 1444535 ~ 1445163 (+)
G104761 NA other upstream 238884 1153061 ~ 1153749 (+)
cmc1 cc068 other upstream 520118 860459 ~ 872515 (+)
G104092 NA other upstream 691362 690046 ~ 701271 (+)
G103851 NA other upstream 1211611 174996 ~ 181022 (+)
G105036 NA other downstream 301522 1699073 ~ 1700431 (+)
G105042 NA other downstream 311418 1708969 ~ 1710557 (+)
G106019 NA other downstream 1123165 2520716 ~ 2527972 (+)
G106122 NA other downstream 1320410 2717961 ~ 2718525 (+)
G106240 NA other downstream 1577272 2974823 ~ 3039475 (+)

Expression


Co-expression Network