G105244


Basic Information

Item Value
gene id G105244
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 1398473 ~ 1402640 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU118583
agaccagacatattgtactgCAGGACCAAATACAGAACAGATCCGACATACTGTACTgcaggacctaatacagaccagaccagacatattgtactgcagggcctaatacagaccagaccagacatattgtactgcggggcctaatacagaccagacatattgtactacaggacctaatacagaccagacatattgtactacaggacctaatacagaccagaccagacatattgtactacaggacccaatacagaccagacatattgtactacaggacctaatacagaccagacatattgtactgcaggacctaatacagaccagacatattgtactgcaggacctaatacagaccagaccagacatattgtactacaggacctaatacagaccagacatattgtactgcagggcctaatacagaccagaccagacatattgtactacaggacctagtacagaccagaccagacatattgtactgcagggcctaatacagaccagaccagacatattgtactacaggacctaatacagaccagaaatattgtactacaggacctaatacagaccagacatatagtactacaggacctaatacagaccagacatattgtattgcaggacctaatacagaccagacatattgtactacaggacctaatacagaccTGACATATTGTACTGCAGGACCTAGTACAGACCAGACAAGCCATATTGTACtacaggacctaatacagaccagaccagacatattgtactacaggacctaatacagaccagatatattgtactacaggacctagtacagaccagaccagacatattgtactacaggaccaaatacagaccagaccagacatactgtactgcaggacctaatacagaccagaccagacatattgtactgcagggcctaatacagaccagaccagatatATTGTACTGCGGGgcctaatacagaccagacatattgtactacaggacctaatacagaccagacatattgtactacaggacctaatacagaccagaccagacatattgtactacaggacccaatacagaccagacatattgtactacaggacctaatacagaccagacatattgtactgcaggacctaatacagaccagacatattgtactgcaggacctaatacagaccagaccagacatattgtactacaggacctaatacagaccagacatattgtactgcagggcctaatacagaccagaccagacatattgtactgcaggacctaatacagaccagacatattgtactacaggacctaatacagaccTGACATATTGTACTGCAGGACCTAGTACAGACCAGACAAGACATATTGTACtacaggacctaatacagaccagaccagacatattgtactacAGGACCTAATAAAGACCAGATATATTGTACTACAGGACCtagtacagaccagaccagacatattgtactgCAGGACCAAATACAGAACAGATCCGACATACTGTACTgcaggacctaatacagaccagaccagacatattgtactgcagggcctaatacagaccagaccagacatattgtactgcggggcctaatacagaccagacatattgtactacaggacctaatacagaccagacatattgtactacaggacctaatacagaccagaccagacatattgtactacaggacccaatacagaccagacatattgtactacaggacctaatacagaccagacataATGTACTgcaggacctaatacagaccagacatattgtactgcaggacctaatacagaccagaccagacatattgtactacaggacctaatacagaccagacatattgtactgcagggcctaatacagaccagaccagacatattgtactacaggacctaatacagaccagacatattgtactgcagggcctaatacagaccagaccagacatattgtactacAGgacctagtacagaccagaccagacatattgtactgcagggcctaatacagaccagaccagacatattgtactacaggacctaatacagaccagacatattgtactacAGGACCTAATACTGACCAGACCAGACATACTGGACTGCAGGACCTAGTACAGACCAGTCCAGACATATTGTACtacaggacctaatacagaccagaccagacatattgtactgcaggacctaatacagaccagacatattgtactgcagggcctaatacagaccagaccagacatattgtactacaggacctaatacagaccagaccagacatattgtactgcaagacctaatacagaccagatATATTGTACTATaggacctaatacagaccagacatattgtactacaggacctaatacagaccagaccagacatattgtactataggacctaatacagaccagatcagacatattgtactacaggacctaatacagaccagacatatagtactacaggacctaatatagaccagaccagatatattgtactacaggacctaatacagaccagaccagacatattgtacagcaggacctaatacagaccagacctgacatattgtactacaggacctaatacagaccagaccagacatattgtactgcaggacctaatacagaccagacctgacatattgtactacaggacctaatacagaccagaccagacatattgtactacaggacctaatacagaccagacatatagtactacaggacctaatacagaccagaccagatatattgtactacaggacctaatacagaccagaccagatatattgtactacaggacctaatacagaccagaccagatatattgtactacaggacctaatacagaccagaccagatatattgtactacaggacctaatacagaccagaccagatatattgtactacaggacctaatacagaccagaccagatatATTGTACTgcaggacctaatacagaccagaccagacatattgtactacaggacctaatacagaccagaccagacatattgtactacag

Function

NR:

description
PREDICTED: uncharacterized protein LOC106589955

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU118583 True 3045 lncRNA 0.42 3 1398473 1402640

Neighbor

gene id symbol gene type direction distance location
LOC118937319 NA coding downstream 82228 1314565 ~ 1316245 (-)
azi2 azi2 coding downstream 493055 879818 ~ 905418 (-)
eomesb eomesb coding downstream 585283 806150 ~ 813190 (-)
LOC110516483 LOC106573240 coding downstream 607602 727654 ~ 790871 (-)
LOC118937315 NA coding downstream 721961 672497 ~ 676512 (-)
LOC110515934 gadl1 coding upstream 24611 1427251 ~ 1457133 (-)
LOC110515405 LOC106590999 coding upstream 170762 1573402 ~ 1683489 (-)
kiaa1143 k1143 coding upstream 300311 1702951 ~ 1704863 (-)
zdhhc3a zdhhc3 coding upstream 306876 1709516 ~ 1732333 (-)
nrsn1 nrsn1 coding upstream 518370 1921010 ~ 1925939 (-)
G105205 NA non-coding downstream 7544 1377083 ~ 1390929 (-)
G105230 NA non-coding downstream 22032 1363753 ~ 1376441 (-)
G105231 NA non-coding downstream 26799 1369961 ~ 1371674 (-)
G105200 NA non-coding downstream 93730 1304512 ~ 1304743 (-)
G105257 NA non-coding upstream 33550 1436190 ~ 1438620 (-)
G105271 NA non-coding upstream 70221 1472861 ~ 1474067 (-)
G105294 NA non-coding upstream 84657 1487297 ~ 1490169 (-)
G105299 NA non-coding upstream 99675 1502315 ~ 1502980 (-)
G105301 NA non-coding upstream 102428 1505068 ~ 1505682 (-)
G105220 NA other downstream 56138 1333986 ~ 1342335 (-)
G105285 NA other upstream 138090 1540730 ~ 1541706 (-)
G105340 NA other upstream 238627 1641267 ~ 1641732 (-)
G105427 NA other upstream 509952 1912592 ~ 1917188 (-)
G105428 NA other upstream 514711 1917351 ~ 1918027 (-)

Expression


Co-expression Network