G104945


Basic Information

Item Value
gene id G104945
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 1401439 ~ 1402879 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU118133
gtattaggtcctgtagtacaatatgtctggtctggtctgtattaggtcctgcagtacaatatgtctggtctgtattaggtcctgcagtacaatatgtctggtctgtattaggtcctgtagtacaatatgtctggtctggtctgtattaggtcctgtagtacaatatttctggtctgtattaggtcctgtagtacaatatgtctggtctgtattaggtcctgcagtacaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU118133 True 229 lncRNA 0.41 3 1401439 1402879

Neighbor

gene id symbol gene type direction distance location
tgfbr2b LOC106606173 coding upstream 10503 1309202 ~ 1390936 (+)
rbms3 rbms3 coding upstream 169904 1023461 ~ 1231535 (+)
LOC110515032 LOC106606177 coding upstream 176535 1222130 ~ 1224904 (+)
LOC118936923 NA coding upstream 431911 968616 ~ 969528 (+)
LOC110506977 LOC106595099 coding upstream 492863 905576 ~ 908576 (+)
LOC118937323 NA coding downstream 21437 1424316 ~ 1426453 (+)
stt3b stt3b coding downstream 53457 1456336 ~ 1564305 (+)
LOC118937324 NA coding downstream 167431 1570310 ~ 1573421 (+)
LOC118937327 NA coding downstream 185303 1585657 ~ 1588650 (+)
LOC118937328 NA coding downstream 185941 1588820 ~ 1589368 (+)
G104944 NA non-coding upstream 2815 1398241 ~ 1398624 (+)
G104942 NA non-coding upstream 3888 1392633 ~ 1397551 (+)
G104937 NA non-coding upstream 17120 1383918 ~ 1384319 (+)
G104928 NA non-coding upstream 30483 1370048 ~ 1370956 (+)
G104925 NA non-coding upstream 39599 1361460 ~ 1361840 (+)
G104948 NA non-coding downstream 4512 1407391 ~ 1408774 (+)
G104955 NA non-coding downstream 41656 1444535 ~ 1445163 (+)
G104959 NA non-coding downstream 45842 1448721 ~ 1449440 (+)
G104963 NA non-coding downstream 49309 1452188 ~ 1452833 (+)
G104761 NA other upstream 247690 1153061 ~ 1153749 (+)
cmc1 cc068 other upstream 528924 860459 ~ 872515 (+)
G104092 NA other upstream 700168 690046 ~ 701271 (+)
G103851 NA other upstream 1220417 174996 ~ 181022 (+)
G105036 NA other downstream 296194 1699073 ~ 1700431 (+)
G105042 NA other downstream 306090 1708969 ~ 1710557 (+)
G106019 NA other downstream 1117837 2520716 ~ 2527972 (+)
G106122 NA other downstream 1315082 2717961 ~ 2718525 (+)
G106240 NA other downstream 1571944 2974823 ~ 3039475 (+)

Expression


Co-expression Network