XLOC_020774 (matk)


Basic Information

Item Value
gene id XLOC_020774
gene name matk
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 5036179 ~ 5054773 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00040966
CTGGACGGCAGGAACGCAGTGCGTCGCTAAAAAGGACCACTGCAAACCCAAAGATGGTGAAATCTCGTATCACAAAGGCGACATCTTGACTCTCGTGGGGCCTGGAATGAGAAAAGGAGAATACACTGCCAGACACAACACAACAGGGGAGGAAGGACAGGTTTCAGGCTCCAATCTCAGAGAAAGAGAAGCGCTGCGTATAGACCCAAAACTGAGCCTCATGCCATGGTTTCATGGCAAAATAGCCGGACAGCAAGCCGTGGACAAACTCAAGCCCACGGAAGACGGGCTTTTCTTGGTGCGGGAATCGGTTCGGCATCCTGGAGACTTCGTGCTGTGCGTTTGCTTCAGTCAGAAAGTGTTTCACTATCGCGTGATCTACCAGGACAATAAACTGACCATCGACAACATGCAGTTCTTCGACAACCTCATCGACATGATTGAGTTTTACAGCAGAAATCGAGGCGCCATCGCTACATTATTACTAAAACCCAAGAAGAAGGAAGGCCTGAAATCTGCCGAGACCAAGCTGCTGAAATCCGGGTGGCTTCTTGATCTCTCAAAGCTGACGTTAGGAGAAATCATCGGGGAAGGAGAGTTCGGTGCGGTGTTTGCAGGTGAATACACCGGACAGCGAGTTGCAGTTAAAATCATCAAATGTGATGTGACGGCGCAGGCTTTCCTCGAGGAGACTTCAGTCATGACAAACCTCCATCATAAGAATCTGGTGCCGTTATTAGGAGTTATTCTGCATAACGGGCTTCATATAGTCACAGAGTTAATGACGAAGggGAATCTGGTGAATTTTCTTCGTTCACGAGGACGTTTCGCTGTTAGTGTGATTCAGCTGCTGCGATTCGCATTagATGTATGTGAAGGAATGGAGCACCTGGAGTCAAAGAAGCTCCTGCATCGAGATCTGGCTGGACGCAACATTCTCGTCTCTGAAGACGGTGTCGCCAAAATCAGTGATTTCGGTTTGGCGAGGGTCGGTTCAATGGCGGTCGACAACTCAAAGTTACCCGTGAAGTGGACAGCACCAGAAGCCTTGAAGAATAAAAAATTCTCCACTCAGTCAGACGTCTGGAGTTACGGAGTGCTTTTATGGGAAATCTTCTCATACGGCAGACAACCGTATCCCAAAATGACTGTGAATGAGGTGAAGGAGTGTGTGGAAAAGGGTTACCGGATGGATCCTCCAGACGAGTGTCCCGCAGACGTTTACAGCATCATGACGTCCTGCTGGCAGACGGAGCCCAAGAAGAGGCCGTCGTTCCACAAACTGCGAGAGCGACTGGAGAAAGAGCTGAAACTGCACACATGA
>TCONS_00040967
ctctccaccaatcagctgAAAAACTGGACGGCAGGAACGCAGTGCGTCGCTAAAAAGGACCACTGCAAACCCAAAGATGGTGAAATCTCGTATCACAAAGGCGACATCTTGACTCTCGTGGGAAAAGGAGAATACACTGCCAGACACAACACAACAGGGGAGGAAGGACAGGTTTCAGGCTCCAATCTCAGAGAAAGAGAAGCGCTGCGTATAGACCCAAAACTGAGCCTCATGCCATGGTTTCATGGCAAAATAGCCGGACAGCAAGCCGTGGACAAACTCAAGCCCACGGAAGACGGGCTTTTCTTGGTGCGGGAATCGGTTCGGCATCCTGGAGACTTCGTGCTGTGCGTTTGCTTCAGTCAGAAAGTGTTTCACTATCGCGTGATCTACCAGGACAATAAACTGACCATCGACAACATGCAGTTCTTCGACAACCTCATCGACATGATTGAGTTTTACAGCAGAAATCGAGGCGCCATCGCTACATTATTACTAAAACCCAAGAAGAAGGAAGGCCTGAAATCTGCCGAGACCAAGCTGCTGAAATCCGGGTGGCTTCTTGATCTCTCAAAGCTGACGTTAGGAGAAATCATCGGGGAAGGAGAGTTCGGTGCGGTGTTTGCAGGTGAATACACCGGACAGCGAGTTGCAGTTAAAATCATCAAATGTGATGTGACGGCGCAGGCTTTCCTCGAGGAGACTTCAGTCATGACAAACCTCCATCATAAGAATCTGGTGCCGTTATTAGGAGTTATTCTGCATAACGGGCTTCATATAGTCACAGAGTTAATGACGAAGggGAATCTGGTGAATTTTCTTCGTTCACGAGGACGTTTCGCTGTTAGTGTGATTCAGCTGCTGCGATTCGCATTagATGTATGTGAAGGAATGGAGCACCTGGAGTCAAAGAAGCTCCTGCATCGAGATCTGGCTGGACGCAACATTCTCGTCTCTGAAGACGGTGTCGCCAAAATCAGTGATTTCGGTTTGGCGAGGGTCGGTTCAATGGCGGTCGACAACTCAAAGTTACCCGTGAAGTGGACAGCACCAGAAGCCTTGAAGAATAAAAAATTCTCCACTCAGTCAGACGTCTGGAGTTACGGAGTGCTTTTATGGGAAATCTTCTCATACGGCAGACAACCGTATCCCAAAATGACTGTGAATGAGGTGAAGGAGTGTGTGGAAAAGGGTTACCGGATGGATCCTCCAGACGAGTGTCCCGCAGACGTTTACAGCATCATGACGTCCTGCTGGCAGACGGAGCCCAAGAAGAGGCCGTCGTTCCACAAACTGCGAGAGCGACTGGAGAAAGAGCTGAAACTGCACACATGA

Function

symbol description
matk Predicted to enable non-membrane spanning protein tyrosine kinase activity. Predicted to act upstream of or within protein phosphorylation. Orthologous to human MATK (megakaryocyte-associated tyrosine kinase).

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0016310 phosphorylation biological_process
GO:0016740 transferase activity molecular_function
GO:0005524 ATP binding molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0004672 protein kinase activity molecular_function
GO:0016301 kinase activity molecular_function
GO:0004713 protein tyrosine kinase activity molecular_function
GO:0004715 non-membrane spanning protein tyrosine kinase activity molecular_function

KEGG:

id description
ko04722 Neurotrophin signaling pathway
ko01001 Protein kinases
ko03016 Transfer RNA biogenesis

ZFIN:

id description
ZDB-GENE-070705-183 Predicted to enable non-membrane spanning protein tyrosine kinase activity. Predicted to act upstream of or within protein phosphorylation. Orthologous to human MATK (megakaryocyte-associated tyrosine kinase).

Ensembl:

ensembl_id ENSDARG00000074670

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00040966 False 1324 mRNA 0.49 11 5036179 5051689
TCONS_00040967 True 1335 mRNA 0.49 12 5036179 5054773

Neighbor

gene id symbol gene type direction distance location
XLOC_020773 rx1 coding downstream 29378 4997784 ~ 5006801 (-)
XLOC_020772 cherp coding downstream 46134 4962370 ~ 4990045 (-)
XLOC_020771 pku300 coding downstream 91384 4939559 ~ 4944795 (-)
XLOC_020770 si:ch73-256j6.2 coding downstream 105116 4926777 ~ 4931063 (-)
XLOC_020769 si:ch73-256j6.3 coding downstream 123148 4908913 ~ 4913031 (-)
XLOC_020775 zfr2 coding upstream 1515 5056288 ~ 5099824 (-)
XLOC_020776 CR936300.2 coding upstream 69141 5123914 ~ 5163133 (-)
XLOC_020777 CR936300.1 coding upstream 85757 5140530 ~ 5145022 (-)
XLOC_020778 tnfaip8l1 coding upstream 98688 5153461 ~ 5171829 (-)
XLOC_020779 ncln coding upstream 178623 5233396 ~ 5252012 (-)
XLOC_020765 NA non-coding downstream 182364 4853062 ~ 4853815 (-)
XLOC_020756 NA non-coding downstream 300842 4733007 ~ 4735337 (-)
XLOC_020752 CU074310.1 non-coding downstream 723061 4311803 ~ 4313118 (-)
XLOC_020750 NA non-coding downstream 1149495 3883607 ~ 3886684 (-)
XLOC_020749 NA non-coding downstream 1294895 3740586 ~ 3741284 (-)
XLOC_020780 NA non-coding upstream 212750 5267523 ~ 5274962 (-)
XLOC_020781 NA non-coding upstream 258198 5312971 ~ 5315589 (-)
XLOC_020784 NA non-coding upstream 398470 5453243 ~ 5463115 (-)
XLOC_020788 NA non-coding upstream 569600 5624373 ~ 5631081 (-)

Expression


Co-expression Network