G104948


Basic Information

Item Value
gene id G104948
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 1407391 ~ 1408774 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU118136
TGAGATTATATTGGGATCTATTGGTTGAGACTACATTGAGGTTATATTGGGGTCTGTTGGTTGAGGCCATGTTGACACTACATTGAGGTTATATTGGGGATCTGTTGGTTGAGGCTATGTTGAGACTACATTGGGGTTATATTGGGGATCTGTTGGTTGAGGCTATGTTGAGACTACATTGAGGTTATATTGGGGTCTGTTGGTTGAGGCCATGTTGACACTACATTGAGGTTATATTGGGGTCTGTTGGTTGAGGCCATGTTGACACTACATTGAGATTATATTGGGGTCTGTTGGTTGAGGCTATGTTGAGACTACATTGAGGTTATATTGGGGTCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU118136 True 340 lncRNA 0.41 3 1407391 1408774

Neighbor

gene id symbol gene type direction distance location
tgfbr2b LOC106606173 coding upstream 16455 1309202 ~ 1390936 (+)
rbms3 rbms3 coding upstream 175856 1023461 ~ 1231535 (+)
LOC110515032 LOC106606177 coding upstream 182487 1222130 ~ 1224904 (+)
LOC118936923 NA coding upstream 437863 968616 ~ 969528 (+)
LOC110506977 LOC106595099 coding upstream 498815 905576 ~ 908576 (+)
LOC118937323 NA coding downstream 15542 1424316 ~ 1426453 (+)
stt3b stt3b coding downstream 47562 1456336 ~ 1564305 (+)
LOC118937324 NA coding downstream 161536 1570310 ~ 1573421 (+)
LOC118937327 NA coding downstream 179408 1585657 ~ 1588650 (+)
LOC118937328 NA coding downstream 180046 1588820 ~ 1589368 (+)
G104945 NA non-coding upstream 4512 1401439 ~ 1402879 (+)
G104944 NA non-coding upstream 8767 1398241 ~ 1398624 (+)
G104942 NA non-coding upstream 9840 1392633 ~ 1397551 (+)
G104937 NA non-coding upstream 23072 1383918 ~ 1384319 (+)
G104928 NA non-coding upstream 36435 1370048 ~ 1370956 (+)
G104955 NA non-coding downstream 35761 1444535 ~ 1445163 (+)
G104959 NA non-coding downstream 39947 1448721 ~ 1449440 (+)
G104963 NA non-coding downstream 43414 1452188 ~ 1452833 (+)
G104979 NA non-coding downstream 49914 1458688 ~ 1459328 (+)
G104761 NA other upstream 253642 1153061 ~ 1153749 (+)
cmc1 cc068 other upstream 534876 860459 ~ 872515 (+)
G104092 NA other upstream 706120 690046 ~ 701271 (+)
G103851 NA other upstream 1226369 174996 ~ 181022 (+)
G105036 NA other downstream 290299 1699073 ~ 1700431 (+)
G105042 NA other downstream 300195 1708969 ~ 1710557 (+)
G106019 NA other downstream 1111942 2520716 ~ 2527972 (+)
G106122 NA other downstream 1309187 2717961 ~ 2718525 (+)
G106240 NA other downstream 1566049 2974823 ~ 3039475 (+)

Expression


Co-expression Network