G104955


Basic Information

Item Value
gene id G104955
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 1444535 ~ 1445163 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU118150
TATAATGTTACTCCAACATCCTGGTCATTAATACTATATACCATCAGAGGACAACAATATAATGTTACTCCAACATCCTGGTCATTAATAACCATCAGAGGACAACAATATAATGTTACTCCAACATCCTGGTCATTACAGgataacagtacagtagtagattACAGTATAATCAACAGCAGTTCCCTAACCCTCACCATGGGTATAATCAACAGCAGTTCCCTAACCCTCACCATGGGTATAATCAACAGCAGTTCCCTAACCCTCACCATGGGTATAATCAACAGCAGTTCCCTAACCCTCACCATGGGTATAATCAACAGCAGTTCCCTAACCCTCACCATGGGTATAATCAACAGCAGTTCCCTAACCCTCACCATGGGTATAATCAACAGCAGTTCCCTAACCCTCACCATGGGTATAATCAACAGCAGTTCCCTAACCCTCACCATGGGTATAAT

Function

NR:

description
probable phospholipid-transporting ATPase VA, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU118150 True 461 lncRNA 0.42 2 1444535 1445163

Neighbor

gene id symbol gene type direction distance location
LOC118937323 NA coding upstream 18258 1424316 ~ 1426453 (+)
tgfbr2b LOC106606173 coding upstream 53599 1309202 ~ 1390936 (+)
rbms3 rbms3 coding upstream 213000 1023461 ~ 1231535 (+)
LOC110515032 LOC106606177 coding upstream 219631 1222130 ~ 1224904 (+)
LOC118936923 NA coding upstream 475007 968616 ~ 969528 (+)
stt3b stt3b coding downstream 11173 1456336 ~ 1564305 (+)
LOC118937324 NA coding downstream 125147 1570310 ~ 1573421 (+)
LOC118937327 NA coding downstream 143019 1585657 ~ 1588650 (+)
LOC118937328 NA coding downstream 143657 1588820 ~ 1589368 (+)
LOC118937325 NA coding downstream 159977 1605140 ~ 1606773 (+)
G104948 NA non-coding upstream 35761 1407391 ~ 1408774 (+)
G104945 NA non-coding upstream 41656 1401439 ~ 1402879 (+)
G104944 NA non-coding upstream 45911 1398241 ~ 1398624 (+)
G104942 NA non-coding upstream 46984 1392633 ~ 1397551 (+)
G104959 NA non-coding downstream 3558 1448721 ~ 1449440 (+)
G104963 NA non-coding downstream 7025 1452188 ~ 1452833 (+)
G104979 NA non-coding downstream 13525 1458688 ~ 1459328 (+)
G104981 NA non-coding downstream 15374 1460537 ~ 1463337 (+)
G104986 NA non-coding downstream 31397 1476560 ~ 1479662 (+)
G104761 NA other upstream 290786 1153061 ~ 1153749 (+)
cmc1 cc068 other upstream 572020 860459 ~ 872515 (+)
G104092 NA other upstream 743264 690046 ~ 701271 (+)
G103851 NA other upstream 1263513 174996 ~ 181022 (+)
G105036 NA other downstream 253910 1699073 ~ 1700431 (+)
G105042 NA other downstream 263806 1708969 ~ 1710557 (+)
G106019 NA other downstream 1075553 2520716 ~ 2527972 (+)
G106122 NA other downstream 1272798 2717961 ~ 2718525 (+)
G106240 NA other downstream 1529660 2974823 ~ 3039475 (+)

Expression


Co-expression Network