G104959


Basic Information

Item Value
gene id G104959
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 1448721 ~ 1449440 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU118155
TGCTATATTAATGACCAGTCTGGGCAGGATCCACAATAAGGTGCTATATTAATGAGCAGTCTAGACAGGATCCACAATAAGGTGCTATATTAATGAGCAGTCTAGACAGGATCCACAATAAGGTGCTATATTAATGACCAGTCTAGACAGGATCCACAATAAGGTGCTATATTAATGAGCAGTCTAGACAGGATCCACAATAAGGTGCTATATTAATGACCAGTCTAGACAGGATCCAAAATAAGGTGCTATACAGACAGGGATTATAAAACCACTTAGTCAATATCTTTCAGGGCAACAGCTGGAACTGAGAAACTCCCTGATAGTTGTGTGCTTGTTGTGATATGTTATCATAAAGAGCAGAGAAACTCCCTGatagttgtgtgtttgtg
>TU118156
TGCTATATTAATGACCAGTCTGGGCAGGATCCACAATAAGGTGCTATATTAATGAGCAGTCTAGACAGGATCCACAATAAGGTGCTATATTAATGACCAGTTTAGACAGGATCCACAAAAAGGTGCTATATTAATGAGCAGTCTAGACAGGATCCACAATAAGGTGCTATATTAATGACCAGTCTAGACAGGATCCACAATAAGGTGCTATATTAATGACCAGTCTAGACAGGATCCAAAATAAGGTGCTATACAGACAGGGATTATAAAACCACTTAGTCAATATCTTTCAGGGCAACAGCTGGAACTGAGAAACTCCCTGATAGTTGTGTGCTTGTTGTGATATGTTATCATAAAGAGCAGAGAAACTCCCTGatagttgtgtgtttgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU118155 False 392 lncRNA 0.40 2 1448721 1449440
TU118156 True 392 lncRNA 0.39 3 1448721 1449440

Neighbor

gene id symbol gene type direction distance location
LOC118937323 NA coding upstream 22444 1424316 ~ 1426453 (+)
tgfbr2b LOC106606173 coding upstream 57785 1309202 ~ 1390936 (+)
rbms3 rbms3 coding upstream 217186 1023461 ~ 1231535 (+)
LOC110515032 LOC106606177 coding upstream 223817 1222130 ~ 1224904 (+)
LOC118936923 NA coding upstream 479193 968616 ~ 969528 (+)
stt3b stt3b coding downstream 6896 1456336 ~ 1564305 (+)
LOC118937324 NA coding downstream 120870 1570310 ~ 1573421 (+)
LOC118937327 NA coding downstream 138742 1585657 ~ 1588650 (+)
LOC118937328 NA coding downstream 139380 1588820 ~ 1589368 (+)
LOC118937325 NA coding downstream 155700 1605140 ~ 1606773 (+)
G104955 NA non-coding upstream 3558 1444535 ~ 1445163 (+)
G104948 NA non-coding upstream 39947 1407391 ~ 1408774 (+)
G104945 NA non-coding upstream 45842 1401439 ~ 1402879 (+)
G104944 NA non-coding upstream 50097 1398241 ~ 1398624 (+)
G104963 NA non-coding downstream 2748 1452188 ~ 1452833 (+)
G104979 NA non-coding downstream 9248 1458688 ~ 1459328 (+)
G104981 NA non-coding downstream 11097 1460537 ~ 1463337 (+)
G104986 NA non-coding downstream 27120 1476560 ~ 1479662 (+)
G104989 NA non-coding downstream 34497 1483937 ~ 1484619 (+)
G104761 NA other upstream 294972 1153061 ~ 1153749 (+)
cmc1 cc068 other upstream 576206 860459 ~ 872515 (+)
G104092 NA other upstream 747450 690046 ~ 701271 (+)
G103851 NA other upstream 1267699 174996 ~ 181022 (+)
G105036 NA other downstream 249633 1699073 ~ 1700431 (+)
G105042 NA other downstream 259529 1708969 ~ 1710557 (+)
G106019 NA other downstream 1071276 2520716 ~ 2527972 (+)
G106122 NA other downstream 1268521 2717961 ~ 2718525 (+)
G106240 NA other downstream 1525383 2974823 ~ 3039475 (+)

Expression


Co-expression Network