G104963


Basic Information

Item Value
gene id G104963
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 1452188 ~ 1452833 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU118160
gttgccattgtcctggttGGAAGAAGGGTCTGTGaatggggaggtgcagcgtgaggtaatacagtagggggaggtgcagagtgaggtaatacagtagggggaggtgcagcgtgaggtaatacagtagggcaggtgcagcgtgaggtaatacagtaggggaggtgcagcgtgaggtaatacagtaggggaggtgcagcgtgaggtaatacagtagggggaggagcagcgtgaggtaatacagtagggggaggtgcagcgtgaggtaatacagtagggggaggtgcagcgtgaggtaatacagtagggggaggtgcagcgtgaggtaatacagtaggggaggtgcagcgtgaggtaatacagtagggggaggagcagcgtgaggtaatacagtagggggaggtgcagcgtgaggtaatacagtagggggaggtgcagcgtgaggtaatacagtagggggaggtgcagcgtgaggtaatacagtaggggaggtgcagcgtgaggtaatacagtagggggaggtgcagtgtgaggtaatacagtaggggaggtgcagcgtgaggtaatacagtagggggaggtgcagcgtgaggtaatacagtaggggaggtgtagcgtg

Function

NR:

description
putative keratin-associated protein 10-like ENSP00000375147

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU118160 True 616 lncRNA 0.56 2 1452188 1452833

Neighbor

gene id symbol gene type direction distance location
LOC118937323 NA coding upstream 25911 1424316 ~ 1426453 (+)
tgfbr2b LOC106606173 coding upstream 61252 1309202 ~ 1390936 (+)
rbms3 rbms3 coding upstream 220653 1023461 ~ 1231535 (+)
LOC110515032 LOC106606177 coding upstream 227284 1222130 ~ 1224904 (+)
LOC118936923 NA coding upstream 482660 968616 ~ 969528 (+)
stt3b stt3b coding downstream 3503 1456336 ~ 1564305 (+)
LOC118937324 NA coding downstream 117477 1570310 ~ 1573421 (+)
LOC118937327 NA coding downstream 135349 1585657 ~ 1588650 (+)
LOC118937328 NA coding downstream 135987 1588820 ~ 1589368 (+)
LOC118937325 NA coding downstream 152307 1605140 ~ 1606773 (+)
G104959 NA non-coding upstream 2748 1448721 ~ 1449440 (+)
G104955 NA non-coding upstream 7025 1444535 ~ 1445163 (+)
G104948 NA non-coding upstream 43414 1407391 ~ 1408774 (+)
G104945 NA non-coding upstream 49309 1401439 ~ 1402879 (+)
G104979 NA non-coding downstream 5855 1458688 ~ 1459328 (+)
G104981 NA non-coding downstream 7704 1460537 ~ 1463337 (+)
G104986 NA non-coding downstream 23727 1476560 ~ 1479662 (+)
G104989 NA non-coding downstream 31104 1483937 ~ 1484619 (+)
G104992 NA non-coding downstream 39469 1492302 ~ 1493023 (+)
G104761 NA other upstream 298439 1153061 ~ 1153749 (+)
cmc1 cc068 other upstream 579673 860459 ~ 872515 (+)
G104092 NA other upstream 750917 690046 ~ 701271 (+)
G103851 NA other upstream 1271166 174996 ~ 181022 (+)
G105036 NA other downstream 246240 1699073 ~ 1700431 (+)
G105042 NA other downstream 256136 1708969 ~ 1710557 (+)
G106019 NA other downstream 1067883 2520716 ~ 2527972 (+)
G106122 NA other downstream 1265128 2717961 ~ 2718525 (+)
G106240 NA other downstream 1521990 2974823 ~ 3039475 (+)

Expression


Co-expression Network