G104981


Basic Information

Item Value
gene id G104981
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 1460537 ~ 1463337 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU118182
AAACATTTCCTGAAACCAACCAACTTCCTCTTGTCTCATCGTTTCTCCTGTTTTACAGGAAACATCAAATCTaatgaaatgttattggtcacagacacgtgTTCAGCAGATTCTATTCCGGATGTCCCAGGAGTGAGACCAGGAGAAcagataatactgtatgtacccgatgtcacaggaaggccagaaagatcaatcaaggacatcaaccagcagagccactgcctgttcaccccgctaccatccaatAGGCTTCTTCTTTCAAGTTAAAcatgcaatatgcagaaatagctccgaccatttcctggttgttaaAATTCGAACAGTTTGCCTAatgtcagtttatgtgacaaaacaagcagtcattgcGTAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU118182 True 374 lncRNA 0.43 2 1460537 1463337

Neighbor

gene id symbol gene type direction distance location
LOC118937323 NA coding upstream 34260 1424316 ~ 1426453 (+)
tgfbr2b LOC106606173 coding upstream 69601 1309202 ~ 1390936 (+)
rbms3 rbms3 coding upstream 229002 1023461 ~ 1231535 (+)
LOC110515032 LOC106606177 coding upstream 235633 1222130 ~ 1224904 (+)
LOC118936923 NA coding upstream 491009 968616 ~ 969528 (+)
LOC118937324 NA coding downstream 106973 1570310 ~ 1573421 (+)
LOC118937327 NA coding downstream 124845 1585657 ~ 1588650 (+)
LOC118937328 NA coding downstream 125483 1588820 ~ 1589368 (+)
LOC118937325 NA coding downstream 141803 1605140 ~ 1606773 (+)
gpd1l LOC105023484 coding downstream 220224 1683561 ~ 1698369 (+)
G104979 NA non-coding upstream 1209 1458688 ~ 1459328 (+)
G104963 NA non-coding upstream 7704 1452188 ~ 1452833 (+)
G104959 NA non-coding upstream 11097 1448721 ~ 1449440 (+)
G104955 NA non-coding upstream 15374 1444535 ~ 1445163 (+)
G104986 NA non-coding downstream 13223 1476560 ~ 1479662 (+)
G104989 NA non-coding downstream 20600 1483937 ~ 1484619 (+)
G104992 NA non-coding downstream 28965 1492302 ~ 1493023 (+)
G104997 NA non-coding downstream 48955 1512292 ~ 1514245 (+)
G104999 NA non-coding downstream 51196 1514533 ~ 1515041 (+)
G104761 NA other upstream 306788 1153061 ~ 1153749 (+)
cmc1 cc068 other upstream 588022 860459 ~ 872515 (+)
G104092 NA other upstream 759266 690046 ~ 701271 (+)
G103851 NA other upstream 1279515 174996 ~ 181022 (+)
G105036 NA other downstream 235736 1699073 ~ 1700431 (+)
G105042 NA other downstream 245632 1708969 ~ 1710557 (+)
G106019 NA other downstream 1057379 2520716 ~ 2527972 (+)
G106122 NA other downstream 1254624 2717961 ~ 2718525 (+)
G106240 NA other downstream 1511486 2974823 ~ 3039475 (+)

Expression


Co-expression Network