G105271


Basic Information

Item Value
gene id G105271
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 1472861 ~ 1474067 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU118617
CGGGAATAGATTTATCACAATAATAACAGACACACAGGGTGAATTAGACCTGTTATTGTCACGTGGCTTTATTCTGTTGTATTATTTGATGTTGCGTTTTCATTTATTCTCACGGTGACGTCAGTCAGCAGCCACACTAAGACAGAGTACAGGATGGGGATATTACCCATACAGGACTAGTTTATCAGGATTAGACTATTACCCATACAGGACTAGTTTATCAGGACTAGGTTATTACCCATACAGGACTAGGTTATTACCCATACAGGACTAGTTTATCAGGATTAGACTATTACCCATACAGGACTAGTTTATCAGGATTAGACTATTACCCATACAGGACTAGTTTATCAGGATTAGACTATTACCCATACAGGACTAGTTTATCAGGACTAGGTTATTACCCATACAGGACTAGGTTATTACCCATACAGGACTAGTTTATCAGGATTAGACTATTACCCATACAGGACTAGTTTATCAGGACTAGGTTATTACCCATACAGGACTAGTTTATCAGGACTAGGTTATTACCCATACAGGACTAGTTTATCAGGATTAGACTATTACCCATACAGGACTAGTTTATCAGGATTAGACTATTACCCATACAGGACTAGTTTATCAGGTTTAGGTTATTGCCCATACAGGACTAGTTTAAGTTTGAGGATGAACCGGAGGTTCTACTGCGGTTGAGGCATAATACCAAACCTGTTTCAGCTCCTCTAAAAACATGATAT

Function

NR:

description
PREDICTED: uncharacterized protein LOC106536431, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU118617 True 740 lncRNA 0.39 4 1472861 1474067

Neighbor

gene id symbol gene type direction distance location
LOC110515934 gadl1 coding downstream 15728 1427251 ~ 1457133 (-)
LOC118937319 NA coding downstream 156616 1314565 ~ 1316245 (-)
azi2 azi2 coding downstream 567443 879818 ~ 905418 (-)
eomesb eomesb coding downstream 659671 806150 ~ 813190 (-)
LOC110516483 LOC106573240 coding downstream 681990 727654 ~ 790871 (-)
LOC110515405 LOC106590999 coding upstream 99335 1573402 ~ 1683489 (-)
kiaa1143 k1143 coding upstream 228884 1702951 ~ 1704863 (-)
zdhhc3a zdhhc3 coding upstream 235449 1709516 ~ 1732333 (-)
nrsn1 nrsn1 coding upstream 446943 1921010 ~ 1925939 (-)
LOC118937333 NA coding upstream 828569 2302636 ~ 2303881 (-)
G105257 NA non-coding downstream 34241 1436190 ~ 1438620 (-)
G105244 NA non-coding downstream 70221 1398473 ~ 1402640 (-)
G105205 NA non-coding downstream 81932 1377083 ~ 1390929 (-)
G105230 NA non-coding downstream 96420 1363753 ~ 1376441 (-)
G105231 NA non-coding downstream 101187 1369961 ~ 1371674 (-)
G105294 NA non-coding upstream 13230 1487297 ~ 1490169 (-)
G105299 NA non-coding upstream 28248 1502315 ~ 1502980 (-)
G105301 NA non-coding upstream 31001 1505068 ~ 1505682 (-)
G105283 NA non-coding upstream 31742 1505809 ~ 1508116 (-)
G105305 NA non-coding upstream 41616 1515683 ~ 1516701 (-)
G105220 NA other downstream 130526 1333986 ~ 1342335 (-)
G105285 NA other upstream 66663 1540730 ~ 1541706 (-)
G105340 NA other upstream 167200 1641267 ~ 1641732 (-)
G105427 NA other upstream 438525 1912592 ~ 1917188 (-)
G105428 NA other upstream 443284 1917351 ~ 1918027 (-)

Expression


Co-expression Network