G104986



Basic Information


Item Value
gene id G104986
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 1476560 ~ 1479662 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU118188
GTCTGACAGGAGACAGTCTGACAGGAGACAGTCTGAGCGGCTACTGCCCAGCTAAAGCCAgtattgcatcatctgttgacAGTGTTGGTGTTATTGTATAATCACACTATGGAATTCATAGCACACCTGTATTACACCTGTATAACACCTGTATTACacctgtattatacctgtatcacacCTTTATTATACCTGTATTACACCTATCACACCTGTATTACACCTGTATTACacctgtattatacctgtatcacacctgtattatacctgtattacACCTATCACACCTGTATTACACCTGTATTACACCTGCATTACACCTGTATTACACCTGTATTACACCTGCATTACACCTGTATTACACCTGTAATATACCTGCATTGCACCTGTATTACACCTGTAATATACCTGCATTGCTATGGGAACCAACCTACACTACACAGAGTACAATATGCATGTGAGGTTATCTTTTAGTTAGGTTGGAGTTGGACACAAAGAAACATATTACTACATAGTAGATGTGGTGATTGTTTTAGCCTTTGGTGCTGTGTGTCCTCCTGTTCACCAGAGATCCTCTGGTGTTGCCTGCTGActgactaacagacagagaggatacaTAGTGGACGAGCATCACCGTTTCCCTGTTTCTGGTGTCTGTGATGCTCTTTAATGAAGACATGTAGGACCCAGGTCCTCATGTTCCTtcagagaggaggggggctgTGTGTCCTCCTCTTCACCAGAGATCCTCTGGTGTTGCCTGCTGActgactaacagacagagaggatacaTAGTGGACGAGCATCACCGTTTCCCTGTTTCTGG

Function


NR:

description
PREDICTED: 5-azacytidine-induced protein 2-like, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU118188 True 826 lncRNA 0.52 2 1476560 1479662

Neighbor


gene id symbol gene type direction distance location
LOC118937323 NA coding upstream 50283 1424316 ~ 1426453 (+)
tgfbr2b LOC106606173 coding upstream 85624 1309202 ~ 1390936 (+)
rbms3 rbms3 coding upstream 245025 1023461 ~ 1231535 (+)
LOC110515032 LOC106606177 coding upstream 251656 1222130 ~ 1224904 (+)
LOC118936923 NA coding upstream 507032 968616 ~ 969528 (+)
LOC118937324 NA coding downstream 90648 1570310 ~ 1573421 (+)
LOC118937327 NA coding downstream 108520 1585657 ~ 1588650 (+)
LOC118937328 NA coding downstream 109158 1588820 ~ 1589368 (+)
LOC118937325 NA coding downstream 125478 1605140 ~ 1606773 (+)
gpd1l LOC105023484 coding downstream 203899 1683561 ~ 1698369 (+)
G104981 NA non-coding upstream 13223 1460537 ~ 1463337 (+)
G104979 NA non-coding upstream 17232 1458688 ~ 1459328 (+)
G104963 NA non-coding upstream 23727 1452188 ~ 1452833 (+)
G104959 NA non-coding upstream 27120 1448721 ~ 1449440 (+)
G104955 NA non-coding upstream 31397 1444535 ~ 1445163 (+)
G104989 NA non-coding downstream 4275 1483937 ~ 1484619 (+)
G104992 NA non-coding downstream 12640 1492302 ~ 1493023 (+)
G104997 NA non-coding downstream 32630 1512292 ~ 1514245 (+)
G104999 NA non-coding downstream 34871 1514533 ~ 1515041 (+)
G105001 NA non-coding downstream 59315 1538977 ~ 1540210 (+)
G104761 NA other upstream 322811 1153061 ~ 1153749 (+)
cmc1 cc068 other upstream 604045 860459 ~ 872515 (+)
G104092 NA other upstream 775289 690046 ~ 701271 (+)
G103851 NA other upstream 1295538 174996 ~ 181022 (+)
G105036 NA other downstream 219411 1699073 ~ 1700431 (+)
G105042 NA other downstream 229307 1708969 ~ 1710557 (+)
G106019 NA other downstream 1041054 2520716 ~ 2527972 (+)
G106122 NA other downstream 1238299 2717961 ~ 2718525 (+)
G106240 NA other downstream 1495161 2974823 ~ 3039475 (+)

Expression



Co-expression Network