G104989


Basic Information

Item Value
gene id G104989
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 1483937 ~ 1484619 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU118191
agagagagagagagagagagagagagagagagagagggagagagagagatggagagagagagagggagagagagagagagagagagggagagagagaggctgtttgTATATAGAGCTGTGAGGGTGACTGCTTTACCAGATGGCCTTttttcctctctttatccctcgcctctctctttctcacactctcaTACTTTCGTCTCTCTCTTCATATTCTCGTCTCTTTCTTTGTCCTCATACCCTCGTCTCCCCCCCAGATACAGTTTCTATCCCCCCCAGATACAGTTTCTATCCCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU118191 True 297 lncRNA 0.49 2 1483937 1484619

Neighbor

gene id symbol gene type direction distance location
LOC118937323 NA coding upstream 57660 1424316 ~ 1426453 (+)
tgfbr2b LOC106606173 coding upstream 93001 1309202 ~ 1390936 (+)
rbms3 rbms3 coding upstream 252402 1023461 ~ 1231535 (+)
LOC110515032 LOC106606177 coding upstream 259033 1222130 ~ 1224904 (+)
LOC118936923 NA coding upstream 514409 968616 ~ 969528 (+)
LOC118937324 NA coding downstream 85691 1570310 ~ 1573421 (+)
LOC118937327 NA coding downstream 103563 1585657 ~ 1588650 (+)
LOC118937328 NA coding downstream 104201 1588820 ~ 1589368 (+)
LOC118937325 NA coding downstream 120521 1605140 ~ 1606773 (+)
gpd1l LOC105023484 coding downstream 198942 1683561 ~ 1698369 (+)
G104986 NA non-coding upstream 4275 1476560 ~ 1479662 (+)
G104981 NA non-coding upstream 20600 1460537 ~ 1463337 (+)
G104979 NA non-coding upstream 24609 1458688 ~ 1459328 (+)
G104963 NA non-coding upstream 31104 1452188 ~ 1452833 (+)
G104959 NA non-coding upstream 34497 1448721 ~ 1449440 (+)
G104992 NA non-coding downstream 7683 1492302 ~ 1493023 (+)
G104997 NA non-coding downstream 27673 1512292 ~ 1514245 (+)
G104999 NA non-coding downstream 29914 1514533 ~ 1515041 (+)
G105001 NA non-coding downstream 54358 1538977 ~ 1540210 (+)
G104761 NA other upstream 330188 1153061 ~ 1153749 (+)
cmc1 cc068 other upstream 611422 860459 ~ 872515 (+)
G104092 NA other upstream 782666 690046 ~ 701271 (+)
G103851 NA other upstream 1302915 174996 ~ 181022 (+)
G105036 NA other downstream 214454 1699073 ~ 1700431 (+)
G105042 NA other downstream 224350 1708969 ~ 1710557 (+)
G106019 NA other downstream 1036097 2520716 ~ 2527972 (+)
G106122 NA other downstream 1233342 2717961 ~ 2718525 (+)
G106240 NA other downstream 1490204 2974823 ~ 3039475 (+)

Expression


Co-expression Network