G104997


Basic Information

Item Value
gene id G104997
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 1512292 ~ 1514245 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU118203
CATGTATCCATGGTTTGTGTGGATACTGACATATATCCATGGTTTCAGGTTTGGGTGGATACTGACATATATCCATGGTTTGTGTGGATACTGACATATATCCATGGTTTGGGTGGATACTGACATATATCCATGGTTTGGGTGGATACTGACATATATCCATGGTTTGGGTGGATACTGACATATATCCATGGTTTGGGTGGATACTGACATATATCCATGGTTTGGGTGGATATTGACATATATCCATGGTTTGGGTGGATACTGACATATATCCATGGTTTGGGTGGATACTGACATATATCCATGGTTTCAGGTTTGGGTGGATACTGACATATATCCATGGTTTCAGGTTTGGGTGGATACTGACATATATCCATGGTTTCAGGTTTGGGTGGATACTGACATATATCCATGGTTTCAGGTTTGGGTGGATACTGACATATATCCATGGTTTGGGTGGATACTGACATATATCCATGGTTTCAGGTTTGGGTGGATACTGAC
>TU118204
CATGTATCCATGGTTTGTGTGGATACTGACATATATCCATGGTTTCAGGTTTGTGTGGATACTGACATATATCCATGGTTTGGGTGGATACTGACATATATCCATGGTTTCAGGTTTGTGTGGATACTGACATATATCCATGGTTTCAGGTTTGGGTGGATACTGACATATATCCATGGTCTCAGGTTTGGGTGGATACTGACATATATCCATGGTTTCAGGTTTGGGTGGATACTGACATATATCCATGGTTTGGGTGGATACTGACATATATCCATGGTTTCAGGTTTGGGTGGATACTGAC
>TU118206
CATGTATCCATGGTTTGTGTGGATACTGACATATATCCATGGTTTCAGGTTTGGGTGGATACTGACATATATCCATGGTTTGTGTGGATACTGACATATATCCATGGTTTGGGTGGATACTGACATATATCCATGGTTTGGGTGGATACTGACATATATCCATGGTTTGGGTGGATACTGACATATATCCATGGTTTGGGTGGATACTGACATATATCCATGGTTTGGGTGGATATTGACATATATCCATGGTTTGGGTGGATACTGACATATATCCATGGTTTGGGTGGATACTGACATATATCCATGGTTTCAGGTTTGGGTGGATACTGACATATATCCATGGTTTCAGGTTTGGGTGGATACTGACATATATCCATGGTTTGTGTGGATACTGACATATATCCATGGTTTGGGTGGATACTGACATATATCCATGGTTTGGGTGGATACTGACATATATCCATGGTTTGGGTGGATACTGACATATATCCATGGTTTGGGTGGATACTGACATATATCCATGGTTTGGGTGGATACTGACATATATCCATGGTTTGGGTGGATATTGACATATATCCATGGTTTGGGTGGATACTGACATATATCCATGGTTTCAGGTTTGGGTGGATACTGACATATATCCATGGTTTCAGGTTTGGGTGGATACTGACATATATCCATGGTTTGGGTGGATACTGACATATATCCATGGTTTCAGGTTTGGGTGGATACTGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU118203 False 507 lncRNA 0.39 3 1512292 1514245
TU118204 False 304 lncRNA 0.41 3 1512292 1514245
TU118206 True 739 lncRNA 0.38 3 1512292 1514245

Neighbor

gene id symbol gene type direction distance location
LOC118937323 NA coding upstream 86015 1424316 ~ 1426453 (+)
tgfbr2b LOC106606173 coding upstream 121356 1309202 ~ 1390936 (+)
rbms3 rbms3 coding upstream 280757 1023461 ~ 1231535 (+)
LOC110515032 LOC106606177 coding upstream 287388 1222130 ~ 1224904 (+)
LOC118936923 NA coding upstream 542764 968616 ~ 969528 (+)
LOC118937324 NA coding downstream 56065 1570310 ~ 1573421 (+)
LOC118937327 NA coding downstream 73937 1585657 ~ 1588650 (+)
LOC118937328 NA coding downstream 74575 1588820 ~ 1589368 (+)
LOC118937325 NA coding downstream 90895 1605140 ~ 1606773 (+)
gpd1l LOC105023484 coding downstream 169316 1683561 ~ 1698369 (+)
G104992 NA non-coding upstream 19269 1492302 ~ 1493023 (+)
G104989 NA non-coding upstream 27673 1483937 ~ 1484619 (+)
G104986 NA non-coding upstream 32630 1476560 ~ 1479662 (+)
G104981 NA non-coding upstream 48955 1460537 ~ 1463337 (+)
G104979 NA non-coding upstream 52964 1458688 ~ 1459328 (+)
G104999 NA non-coding downstream 288 1514533 ~ 1515041 (+)
G105001 NA non-coding downstream 24732 1538977 ~ 1540210 (+)
G105014 NA non-coding downstream 75350 1589595 ~ 1591453 (+)
G105019 NA non-coding downstream 83341 1597586 ~ 1597987 (+)
G104761 NA other upstream 358543 1153061 ~ 1153749 (+)
cmc1 cc068 other upstream 639777 860459 ~ 872515 (+)
G104092 NA other upstream 811021 690046 ~ 701271 (+)
G103851 NA other upstream 1331270 174996 ~ 181022 (+)
G105036 NA other downstream 184828 1699073 ~ 1700431 (+)
G105042 NA other downstream 194724 1708969 ~ 1710557 (+)
G106019 NA other downstream 1006471 2520716 ~ 2527972 (+)
G106122 NA other downstream 1203716 2717961 ~ 2718525 (+)
G106240 NA other downstream 1460578 2974823 ~ 3039475 (+)

Expression


Co-expression Network