XLOC_020777 (CR936300.1)


Basic Information

Item Value
gene id XLOC_020777
gene name CR936300.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 5140530 ~ 5145022 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00040972
TTAGTGGGAATTGTCTACAAGCGTGCCTTTACACCAGCCTAAGAAACAACATCCCTCTGTCCACCCACGGCCGTCTGGGACTGAGAAGAAAAGAAATAGAGAGGATGAGCGACACAAGACATTAACAGAGAAAGCCTGGAGGAGTGGGCTGAATAACAAAGAGATCCTGACTAAGAATAACAAAAGGAGACATGAGCGAACGGCGCGCGCGTTTCATACGTGCTTTTgaactttttcttatttacaCCGGGGGACAAGGCCACCAGGACGTCACCGTCACCATCCTGCAACCGAGAAATTCAATGCAATCTGAAGATGAAGACGTTTTCATAAAGTACTGATATGCAACAcctgtacaaaaaataaaaggaGCTGACGGCTTTTGATCCGAGAGCGACGAGCGTTAGGAATCTGAATTAAGGATTTGATCTGCGGCAAATGTCAATGTCACGACTGACGGTAAATTTTAAAGAAGctcttcaagaaaaaaaaaaacctgttcattttt

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000091867

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00040972 True 508 lncRNA 0.44 2 5140530 5145022

Neighbor

gene id symbol gene type direction distance location
XLOC_020775 zfr2 coding downstream 40706 5056288 ~ 5099824 (-)
XLOC_020774 matk coding downstream 85757 5036179 ~ 5054773 (-)
XLOC_020773 rx1 coding downstream 133729 4997784 ~ 5006801 (-)
XLOC_020772 cherp coding downstream 150485 4962370 ~ 4990045 (-)
XLOC_020771 pku300 coding downstream 195735 4939559 ~ 4944795 (-)
XLOC_020778 tnfaip8l1 coding upstream 8439 5153461 ~ 5171829 (-)
XLOC_020779 ncln coding upstream 88374 5233396 ~ 5252012 (-)
XLOC_020780 NA coding upstream 122501 5267523 ~ 5274962 (-)
XLOC_020781 NA coding upstream 167949 5312971 ~ 5315589 (-)
XLOC_020782 s1pr4 coding upstream 175393 5320415 ~ 5323482 (-)
XLOC_020765 NA non-coding downstream 286715 4853062 ~ 4853815 (-)
XLOC_020756 NA non-coding downstream 405193 4733007 ~ 4735337 (-)
XLOC_020752 CU074310.1 non-coding downstream 827412 4311803 ~ 4313118 (-)
XLOC_020750 NA non-coding downstream 1253846 3883607 ~ 3886684 (-)
XLOC_020749 NA non-coding downstream 1399246 3740586 ~ 3741284 (-)
XLOC_020784 NA non-coding upstream 308221 5453243 ~ 5463115 (-)
XLOC_020788 NA non-coding upstream 479351 5624373 ~ 5631081 (-)
XLOC_020792 NA non-coding upstream 556238 5701260 ~ 5724131 (-)

Expression


Co-expression Network