G105014


Basic Information

Item Value
gene id G105014
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 1589595 ~ 1591453 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU118229
cacacacacacacaccaccccctcaCCATATGTGTTCTCTCTCCTGGTTTTCATTAGCATATCTGCTATGACTCAGGGGGGAGACAAGGAGACCGTCCTCGTTAGTAATTCATGCTGTCCTAATTACTGAGAGGACTAATTGTCCGTGAGACTCAGGATAGCATAATGTCAGAAACTGCTTTGATAATCATTCAATTAAACAGACTTTATTacgaagcaaaaacatgtttgttGTTAAAGGGTCAACTATTTGACATCAACGTGGAGAAGGGCTGAATCTGCTCAGTGTGTTCTGCAATATTAAAGACACAAATAAACGTTTTCAGGAATGTTTAGCTTTCGGTAAACAGTTGATCATCAAGAAGACATGTTTAGTCTGACGTCCCTCAGCGCTCTACACACAGTATCCAGAGGTACAACACACTACAGACCTCCCTCAGTGCTCTACACACAGTATCCAGAGGTACAACACACTACAGTCCTCCCTCAGCGCTCTACACACAGTATCCAGAGGTACAACACACTACAGTCTTCACTAAGAGTGGTACAACACACTACAGTCTTCACTAAGAGTGGTACAACACACTACAGTCTTCACTAAGAGTGGTACAACACACTACAGTCTTCACTAAGAGTGGTACAACACACTACAGTCTTCACTAAGAGTGGTCCAACACACTACAGTCTTCACTAAGAGTGGTACAACACACTACAGTCTTCCCGTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU118229 True 726 lncRNA 0.41 4 1589595 1591453

Neighbor

gene id symbol gene type direction distance location
LOC118937328 NA coding upstream 227 1588820 ~ 1589368 (+)
LOC118937327 NA coding upstream 945 1585657 ~ 1588650 (+)
LOC118937324 NA coding upstream 16174 1570310 ~ 1573421 (+)
stt3b stt3b coding upstream 25290 1456336 ~ 1564305 (+)
LOC118937323 NA coding upstream 163318 1424316 ~ 1426453 (+)
LOC118937325 NA coding downstream 13687 1605140 ~ 1606773 (+)
gpd1l LOC105023484 coding downstream 92108 1683561 ~ 1698369 (+)
tmem42a LOC106595323 coding downstream 113436 1704889 ~ 1707675 (+)
LOC110514512 LOC105016610 coding downstream 153845 1745298 ~ 1794938 (+)
slc6a3 slc6a3 coding downstream 225355 1816808 ~ 1853570 (+)
G105001 NA non-coding upstream 49385 1538977 ~ 1540210 (+)
G104999 NA non-coding upstream 74554 1514533 ~ 1515041 (+)
G104997 NA non-coding upstream 75350 1512292 ~ 1514245 (+)
G104992 NA non-coding upstream 96572 1492302 ~ 1493023 (+)
G105019 NA non-coding downstream 6133 1597586 ~ 1597987 (+)
G105020 NA non-coding downstream 6732 1598185 ~ 1599541 (+)
G105049 NA non-coding downstream 42284 1633737 ~ 1634417 (+)
G105052 NA non-coding downstream 49369 1640822 ~ 1641037 (+)
G105058 NA non-coding downstream 57504 1648957 ~ 1649297 (+)
tgfbr2b LOC106606173 other upstream 236732 1309202 ~ 1390936 (+)
G104761 NA other upstream 435846 1153061 ~ 1153749 (+)
cmc1 cc068 other upstream 717080 860459 ~ 872515 (+)
G104092 NA other upstream 888324 690046 ~ 701271 (+)
G103851 NA other upstream 1408573 174996 ~ 181022 (+)
G105036 NA other downstream 107620 1699073 ~ 1700431 (+)
G105042 NA other downstream 117516 1708969 ~ 1710557 (+)
G106019 NA other downstream 929263 2520716 ~ 2527972 (+)
G106122 NA other downstream 1126508 2717961 ~ 2718525 (+)
G106240 NA other downstream 1383370 2974823 ~ 3039475 (+)

Expression


Co-expression Network