G105019


Basic Information

Item Value
gene id G105019
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 1597586 ~ 1597987 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU118238
ACACCAGTTAACACAGTAGTTTACACACCAGTTAACACAGTAGTTTACACACCAGTTAACACAGTAGATTACACACCAGTTAACACAGTAGTTTACACACCAGTTAACACAGTAGTTTACACACCAGTTAACACAGTAGTTTACACACCAGTTAACACAGTAGTTTACACACCAGTTAACACAGTAGTTTACACCAGTTAACACAGTAGTTTACACCAGTTAACACAGTAGTTTACAACAGTTAACACAGTAGTTTACACAC

Function

NR:

description
hypothetical protein cypCar_00039316

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU118238 True 262 lncRNA 0.43 2 1597586 1597987

Neighbor

gene id symbol gene type direction distance location
LOC118937328 NA coding upstream 8218 1588820 ~ 1589368 (+)
LOC118937327 NA coding upstream 8936 1585657 ~ 1588650 (+)
LOC118937324 NA coding upstream 24165 1570310 ~ 1573421 (+)
stt3b stt3b coding upstream 33281 1456336 ~ 1564305 (+)
LOC118937323 NA coding upstream 171309 1424316 ~ 1426453 (+)
LOC118937325 NA coding downstream 7153 1605140 ~ 1606773 (+)
gpd1l LOC105023484 coding downstream 85574 1683561 ~ 1698369 (+)
tmem42a LOC106595323 coding downstream 106902 1704889 ~ 1707675 (+)
LOC110514512 LOC105016610 coding downstream 147311 1745298 ~ 1794938 (+)
slc6a3 slc6a3 coding downstream 218821 1816808 ~ 1853570 (+)
G105014 NA non-coding upstream 6133 1589595 ~ 1591453 (+)
G105001 NA non-coding upstream 57376 1538977 ~ 1540210 (+)
G104999 NA non-coding upstream 82545 1514533 ~ 1515041 (+)
G104997 NA non-coding upstream 83341 1512292 ~ 1514245 (+)
G105020 NA non-coding downstream 198 1598185 ~ 1599541 (+)
G105049 NA non-coding downstream 35750 1633737 ~ 1634417 (+)
G105052 NA non-coding downstream 42835 1640822 ~ 1641037 (+)
G105058 NA non-coding downstream 50970 1648957 ~ 1649297 (+)
G105060 NA non-coding downstream 51620 1649607 ~ 1650827 (+)
tgfbr2b LOC106606173 other upstream 244723 1309202 ~ 1390936 (+)
G104761 NA other upstream 443837 1153061 ~ 1153749 (+)
cmc1 cc068 other upstream 725071 860459 ~ 872515 (+)
G104092 NA other upstream 896315 690046 ~ 701271 (+)
G103851 NA other upstream 1416564 174996 ~ 181022 (+)
G105036 NA other downstream 101086 1699073 ~ 1700431 (+)
G105042 NA other downstream 110982 1708969 ~ 1710557 (+)
G106019 NA other downstream 922729 2520716 ~ 2527972 (+)
G106122 NA other downstream 1119974 2717961 ~ 2718525 (+)
G106240 NA other downstream 1376836 2974823 ~ 3039475 (+)

Expression


Co-expression Network