Gene
RNA
| Item | Value |
|---|---|
| gene id | G105063 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 1661588 ~ 1662075 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU118312 | False | 357 | lncRNA | 0.40 | 2 | 1661588 | 1662075 |
| TU118313 | True | 429 | lncRNA | 0.40 | 2 | 1661588 | 1662075 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118937325 | NA | coding | upstream | 54815 | 1605140 ~ 1606773 (+) |
| LOC118937328 | NA | coding | upstream | 72220 | 1588820 ~ 1589368 (+) |
| LOC118937327 | NA | coding | upstream | 72938 | 1585657 ~ 1588650 (+) |
| LOC118937324 | NA | coding | upstream | 88167 | 1570310 ~ 1573421 (+) |
| stt3b | stt3b | coding | upstream | 97283 | 1456336 ~ 1564305 (+) |
| gpd1l | LOC105023484 | coding | downstream | 21486 | 1683561 ~ 1698369 (+) |
| tmem42a | LOC106595323 | coding | downstream | 42814 | 1704889 ~ 1707675 (+) |
| LOC110514512 | LOC105016610 | coding | downstream | 83223 | 1745298 ~ 1794938 (+) |
| slc6a3 | slc6a3 | coding | downstream | 154733 | 1816808 ~ 1853570 (+) |
| LOC110511503 | LOC106605726 | coding | downstream | 203290 | 1865365 ~ 1901456 (+) |
| G105060 | NA | non-coding | upstream | 10761 | 1649607 ~ 1650827 (+) |
| G105058 | NA | non-coding | upstream | 12291 | 1648957 ~ 1649297 (+) |
| G105052 | NA | non-coding | upstream | 20551 | 1640822 ~ 1641037 (+) |
| G105049 | NA | non-coding | upstream | 27171 | 1633737 ~ 1634417 (+) |
| G105020 | NA | non-coding | upstream | 62047 | 1598185 ~ 1599541 (+) |
| G105064 | NA | non-coding | downstream | 230 | 1662305 ~ 1662525 (+) |
| G105065 | NA | non-coding | downstream | 478 | 1662553 ~ 1663100 (+) |
| G105068 | NA | non-coding | downstream | 3063 | 1665138 ~ 1665423 (+) |
| G105069 | NA | non-coding | downstream | 3954 | 1666029 ~ 1666509 (+) |
| G105074 | NA | non-coding | downstream | 10951 | 1673026 ~ 1673793 (+) |
| tgfbr2b | LOC106606173 | other | upstream | 308725 | 1309202 ~ 1390936 (+) |
| G104761 | NA | other | upstream | 507839 | 1153061 ~ 1153749 (+) |
| cmc1 | cc068 | other | upstream | 789073 | 860459 ~ 872515 (+) |
| G104092 | NA | other | upstream | 960317 | 690046 ~ 701271 (+) |
| G103851 | NA | other | upstream | 1480566 | 174996 ~ 181022 (+) |
| G105036 | NA | other | downstream | 36998 | 1699073 ~ 1700431 (+) |
| G105042 | NA | other | downstream | 46894 | 1708969 ~ 1710557 (+) |
| G106019 | NA | other | downstream | 858641 | 2520716 ~ 2527972 (+) |
| G106122 | NA | other | downstream | 1055886 | 2717961 ~ 2718525 (+) |
| G106240 | NA | other | downstream | 1312748 | 2974823 ~ 3039475 (+) |
