G105064


Basic Information

Item Value
gene id G105064
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 1662305 ~ 1662525 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU118314
GTCTAACATGGAGCCATTTCCCCAGTCTAACATGGAACCATTTCCCCAGTCTAACTCTACTCTAACATGGAGCCATTTCCCCAGTCTAACTCTACTCTAACATGGAGCCATTTCCCCAGTCTAACTCTACTCTAACATGGAGCCATTTCCCCAGTCTAACATGGAGCCATTTCCCCAGTCTAACTCTACTCTAACATGGAGCCATTTCCCCAGTCTAACAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU118314 True 221 lncRNA 0.46 1 1662305 1662525

Neighbor

gene id symbol gene type direction distance location
LOC118937325 NA coding upstream 55532 1605140 ~ 1606773 (+)
LOC118937328 NA coding upstream 72937 1588820 ~ 1589368 (+)
LOC118937327 NA coding upstream 73655 1585657 ~ 1588650 (+)
LOC118937324 NA coding upstream 88884 1570310 ~ 1573421 (+)
stt3b stt3b coding upstream 98000 1456336 ~ 1564305 (+)
gpd1l LOC105023484 coding downstream 21036 1683561 ~ 1698369 (+)
tmem42a LOC106595323 coding downstream 42364 1704889 ~ 1707675 (+)
LOC110514512 LOC105016610 coding downstream 82773 1745298 ~ 1794938 (+)
slc6a3 slc6a3 coding downstream 154283 1816808 ~ 1853570 (+)
LOC110511503 LOC106605726 coding downstream 202840 1865365 ~ 1901456 (+)
G105063 NA non-coding upstream 230 1661588 ~ 1662075 (+)
G105060 NA non-coding upstream 11478 1649607 ~ 1650827 (+)
G105058 NA non-coding upstream 13008 1648957 ~ 1649297 (+)
G105052 NA non-coding upstream 21268 1640822 ~ 1641037 (+)
G105049 NA non-coding upstream 27888 1633737 ~ 1634417 (+)
G105065 NA non-coding downstream 28 1662553 ~ 1663100 (+)
G105068 NA non-coding downstream 2613 1665138 ~ 1665423 (+)
G105069 NA non-coding downstream 3504 1666029 ~ 1666509 (+)
G105074 NA non-coding downstream 10501 1673026 ~ 1673793 (+)
G105078 NA non-coding downstream 16533 1679058 ~ 1679487 (+)
tgfbr2b LOC106606173 other upstream 309442 1309202 ~ 1390936 (+)
G104761 NA other upstream 508556 1153061 ~ 1153749 (+)
cmc1 cc068 other upstream 789790 860459 ~ 872515 (+)
G104092 NA other upstream 961034 690046 ~ 701271 (+)
G103851 NA other upstream 1481283 174996 ~ 181022 (+)
G105036 NA other downstream 36548 1699073 ~ 1700431 (+)
G105042 NA other downstream 46444 1708969 ~ 1710557 (+)
G106019 NA other downstream 858191 2520716 ~ 2527972 (+)
G106122 NA other downstream 1055436 2717961 ~ 2718525 (+)
G106240 NA other downstream 1312298 2974823 ~ 3039475 (+)

Expression


Co-expression Network