Gene
RNA
| Item | Value |
|---|---|
| gene id | G105376 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 1679618 ~ 1679916 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU118804 | True | 299 | lncRNA | 0.49 | 1 | 1679618 | 1679916 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110515934 | gadl1 | coding | downstream | 222485 | 1427251 ~ 1457133 (-) |
| LOC118937319 | NA | coding | downstream | 363373 | 1314565 ~ 1316245 (-) |
| azi2 | azi2 | coding | downstream | 774200 | 879818 ~ 905418 (-) |
| eomesb | eomesb | coding | downstream | 866428 | 806150 ~ 813190 (-) |
| LOC110516483 | LOC106573240 | coding | downstream | 888747 | 727654 ~ 790871 (-) |
| kiaa1143 | k1143 | coding | upstream | 23035 | 1702951 ~ 1704863 (-) |
| zdhhc3a | zdhhc3 | coding | upstream | 29600 | 1709516 ~ 1732333 (-) |
| nrsn1 | nrsn1 | coding | upstream | 241094 | 1921010 ~ 1925939 (-) |
| LOC118937333 | NA | coding | upstream | 622720 | 2302636 ~ 2303881 (-) |
| LOC118937335 | NA | coding | upstream | 750359 | 2273420 ~ 2440302 (-) |
| G105368 | NA | non-coding | downstream | 1570 | 1668015 ~ 1678048 (-) |
| G105356 | NA | non-coding | downstream | 18965 | 1660230 ~ 1660653 (-) |
| G105355 | NA | non-coding | downstream | 21150 | 1658184 ~ 1658468 (-) |
| G105353 | NA | non-coding | downstream | 21537 | 1655274 ~ 1658081 (-) |
| G105352 | NA | non-coding | downstream | 23959 | 1655047 ~ 1655659 (-) |
| LOC110515405 | LOC106590999 | non-coding | upstream | 2853 | 1573402 ~ 1683489 (-) |
| G105381 | NA | non-coding | upstream | 10050 | 1689966 ~ 1693400 (-) |
| G105385 | NA | non-coding | upstream | 21455 | 1701371 ~ 1702470 (-) |
| G105386 | NA | non-coding | upstream | 27647 | 1707563 ~ 1707903 (-) |
| G105394 | NA | non-coding | upstream | 56786 | 1736702 ~ 1736975 (-) |
| G105340 | NA | other | downstream | 37886 | 1641267 ~ 1641732 (-) |
| G105285 | NA | other | downstream | 137912 | 1540730 ~ 1541706 (-) |
| G105220 | NA | other | downstream | 337283 | 1333986 ~ 1342335 (-) |
| G105427 | NA | other | upstream | 232676 | 1912592 ~ 1917188 (-) |
| G105428 | NA | other | upstream | 237435 | 1917351 ~ 1918027 (-) |
| G105492 | NA | other | upstream | 278568 | 1958484 ~ 1961587 (-) |
| G105636 | NA | other | upstream | 438163 | 2118079 ~ 2120501 (-) |
| G105938 | NA | other | upstream | 683083 | 2362999 ~ 2363531 (-) |
