G105385


Basic Information

Item Value
gene id G105385
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 1701371 ~ 1702470 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU118814
TCACAGAGGACTGATTTAGTTACCAGGTTGATAAATCACAGAGGACTGATTTTAATTACCTTGGTAGTTAAACTGATAAGAAGGATGGCTTGGAGGTTACAATCACAAGCCAAACAATAAAATGCAAAATTAAATATCAAGAAACCTTCGTACGCCACACCCCATAACCTTTGGCTGTAACGTGTTGGTCTGTCTAATCATCTACTGAATGCTGATCATTCATAAGTAGACTGACTACAGTCTGTATGTAAATCCACTTCTAATGTAGTGGAACATGCATTCAAATCCAAATAGGCCTAGTCCCCTGGCAACCTGGTAACCGGGCAACCTGGTTTGTTGGTTGCTCTTGCCAACTCCCGTTGCTGTCATTGCCATGACAATGATTTGGTATGACGCcataaacagactggcactcgAGACTAAATCCCCGGCGGTAGAACTCGTGAAGGCATCTTGATCATAAATCGACCCACAAAACCTGACGTTAGTAAACCACATTAGATGATTATAGGGAAACAAATGAAACCCTTTTTTAATAATGgtataaaacaatataaaaaaaaaacacattgaaaTGCCTACATACCCGTCTGAATGCAGTAGGGTACGGGTACTATACATACACTATTGTTTTAGACTCTTGCCATTCACAAATGGTATCTGTCAatcactacactcttagaattaGTGGTGACTCGAGGAACCCTGGAGTTCCTCAAGAAGCTATGCATTTCCCAAAGTTGGAATAGTTTCCGCATGTAATCAACCATGTTAATATTATTATATTAGAATATGTAATATGCGTAAATATTCAAGGAACATTTTAAATTGCAGTGTACAAACTTAACATGAACAAGAAATGACATTTACGCTAAACGGGtgaccaaaaataactatctgaaagccacgccTCCAATAAGCCACGCCTTCAATCTGATAGGCTGCCACCTTTACAATATATAATTAAAAagggtataaaaaaaaaagaactcTTCTACCATCACAAAAAGGATCCGGTTTGAAACTTTACCCAGGAGTTCCTCGACGACCCTTTTCAGAGGGGGTTTCCTCGACGACCCTTTTCAGAGGGGGTTTCCTCG

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU118814 True 1100 lncRNA 0.39 1 1701371 1702470

Neighbor

gene id symbol gene type direction distance location
LOC110515405 LOC106590999 coding downstream 17882 1573402 ~ 1683489 (-)
LOC110515934 gadl1 coding downstream 244238 1427251 ~ 1457133 (-)
LOC118937319 NA coding downstream 385126 1314565 ~ 1316245 (-)
azi2 azi2 coding downstream 795953 879818 ~ 905418 (-)
eomesb eomesb coding downstream 888181 806150 ~ 813190 (-)
kiaa1143 k1143 coding upstream 481 1702951 ~ 1704863 (-)
zdhhc3a zdhhc3 coding upstream 7046 1709516 ~ 1732333 (-)
nrsn1 nrsn1 coding upstream 218540 1921010 ~ 1925939 (-)
LOC118937333 NA coding upstream 600166 2302636 ~ 2303881 (-)
LOC118937335 NA coding upstream 727805 2273420 ~ 2440302 (-)
G105381 NA non-coding downstream 7971 1689966 ~ 1693400 (-)
G105376 NA non-coding downstream 21455 1679618 ~ 1679916 (-)
G105368 NA non-coding downstream 23323 1668015 ~ 1678048 (-)
G105356 NA non-coding downstream 40718 1660230 ~ 1660653 (-)
G105386 NA non-coding upstream 5093 1707563 ~ 1707903 (-)
G105394 NA non-coding upstream 34232 1736702 ~ 1736975 (-)
G105402 NA non-coding upstream 53933 1756403 ~ 1756941 (-)
G105406 NA non-coding upstream 59845 1762315 ~ 1764283 (-)
G105409 NA non-coding upstream 73465 1775935 ~ 1776987 (-)
G105340 NA other downstream 59639 1641267 ~ 1641732 (-)
G105285 NA other downstream 159665 1540730 ~ 1541706 (-)
G105220 NA other downstream 359036 1333986 ~ 1342335 (-)
G105427 NA other upstream 210122 1912592 ~ 1917188 (-)
G105428 NA other upstream 214881 1917351 ~ 1918027 (-)
G105492 NA other upstream 256014 1958484 ~ 1961587 (-)
G105636 NA other upstream 415609 2118079 ~ 2120501 (-)
G105938 NA other upstream 660529 2362999 ~ 2363531 (-)

Expression


Co-expression Network