G105042


Basic Information

Item Value
gene id G105042
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 1708969 ~ 1710557 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU118283
ACCACCTCATTTGCATACCATGCAGAACAAGGCCAGTAACTGTTACCACCTAATTTGCATATCATGCAGAACAAGGCCAGTAGAACAAGGCCAGTAACTGTCAATTCTCAACTTGACAGTTTATAAAGGCACTCAGTGAAGTAAGATTAAAGACAACGGACTGTCTAGATTCTGCATAGTCCACAGGTCATTTTCTAGAGGTCTTCCCGTACTGAACCTGTAGAGCTGTGTATGCAGGAGATGCTCTGGAGTACTGAAAGAGCCCGTTTGGGTACAATCCAACTCGTCTTCGTTGGGACTTGTACCTCGTTCACGTCACCAGGGGTATCGACCTGGACATGTTGTGGCTCATTCTTTAAAAGAACATTTGGTGCAGGGTCCCTTTAAGGCTTTGGTCCAAGCAGCAGTAGCACTGTGGGAAGGGGACACCGCACTCGACCAGTGGAGTCtgtatagaaatagaatgaatagaactgGCATCTCTATAAAAGCCTAGTCCagatctctcttcccccccccctacAAAAATGTACAATTCACACGTGTATAATACACACTGGTACATGTCtgaaataggacaaatgtaaATCACCCTCCTAATTATTAAGTCAACGACACCATAATGGATCATAACACCAGGCTTCCATAGCTAGTGTACCCAGGAGTTCACCAGTCAAAACCTGCCAGGGTGCGAGGTTCCACgcccattctattcattctagtTCTACGGGAGTCTCACGACACTAGACCAGCGGTATCTCTATGACGTCGTCCTCGATGATCTCCCCCTGCGGCAGCGCCACGTGGTCATTGGGATCCCTCTTACAGCGGAGGTCAGAGAAGGGACTGAGCCAGGATGGGGAGAAGGGCCCTCCAAACGCTGACTTCATCGCCTCCCAGCAGGAAGTCTTCTCCCACCTGGCCTGCTCCCCCTTCAGACGTTCGATGccctggaacagagagacagagacagagacacacacacacagagagagagagacagagagagagagacacacacagagagagagagagacacacacagagagagagagagagagacacacagacagagagagagagagacacacacacagaacacagtgaGCTGTAGACAGAGGAAACTGAATCAAAACATGTCATTAATTTAGGGGCCCTAAGTACAATGTTCCCTTAGTCATGCATTGGTTTCAATGGGAGATCCTGTGAAGCATGTGACTTAAGTGGCTGGTTTCCTGAACCCAGATGACGTCTCCTTTTGGACTAACATGCTCAAAACGGACACTTCGTGGGTGTGGAAACCATATTATTTCTGACGAGGCACGGACACCGACGGTGTTGTCTCGTCCTACGTGTTGTCGAAGTTGTTGGCACACGACAACACAGTGAACAGACGTCCGGACTAACTCTGTCAACGAAGACGTCCGGACTAACTCTGTCAACGAAGACGTCCGGACTAACTCTGTCAACGAAGACGTCCGGACTAACTCTGTCAACGAAGACGTCCGGACTAACTCTGTCAACGAAGACGTCCGGACTAACTCTGTC

Function

NR:

description
palmitoyltransferase ZDHHC3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU118283 True 1548 TUCP 0.49 2 1708969 1710557

Neighbor

gene id symbol gene type direction distance location
tmem42a LOC106595323 coding upstream 1294 1704889 ~ 1707675 (+)
gpd1l LOC105023484 coding upstream 10600 1683561 ~ 1698369 (+)
LOC118937325 NA coding upstream 102196 1605140 ~ 1606773 (+)
LOC118937328 NA coding upstream 119601 1588820 ~ 1589368 (+)
LOC118937327 NA coding upstream 120319 1585657 ~ 1588650 (+)
LOC110514512 LOC105016610 coding downstream 34741 1745298 ~ 1794938 (+)
slc6a3 slc6a3 coding downstream 106251 1816808 ~ 1853570 (+)
LOC110511503 LOC106605726 coding downstream 154808 1865365 ~ 1901456 (+)
LOC110516539 NA coding downstream 405996 2116553 ~ 2120455 (+)
LOC118944029 NA coding downstream 455564 2166121 ~ 2177996 (+)
G105030 k1143 non-coding upstream 4123 1702955 ~ 1704846 (+)
G105083 NA non-coding upstream 12544 1695943 ~ 1696425 (+)
G105078 NA non-coding upstream 29482 1679058 ~ 1679487 (+)
G105074 NA non-coding upstream 35176 1673026 ~ 1673793 (+)
G105069 NA non-coding upstream 42460 1666029 ~ 1666509 (+)
G105091 NA non-coding downstream 11438 1721995 ~ 1722691 (+)
G105107 NA non-coding downstream 45824 1756381 ~ 1757197 (+)
G105111 NA non-coding downstream 56252 1766809 ~ 1771032 (+)
G105043 NA non-coding downstream 87941 1798498 ~ 1799324 (+)
G105039 NA non-coding downstream 89116 1799673 ~ 1799993 (+)
G105036 NA other upstream 8538 1699073 ~ 1700431 (+)
tgfbr2b LOC106606173 other upstream 356106 1309202 ~ 1390936 (+)
G104761 NA other upstream 555220 1153061 ~ 1153749 (+)
cmc1 cc068 other upstream 836454 860459 ~ 872515 (+)
G104092 NA other upstream 1007698 690046 ~ 701271 (+)
G106019 NA other downstream 810159 2520716 ~ 2527972 (+)
G106122 NA other downstream 1007404 2717961 ~ 2718525 (+)
G106240 NA other downstream 1264266 2974823 ~ 3039475 (+)
G106253 cdkal other downstream 1496240 3006312 ~ 3391033 (+)
mboat1 LOC106573215 other downstream 1656648 3350582 ~ 3487129 (+)

Expression


Co-expression Network