Gene
RNA
| Item | Value |
|---|---|
| gene id | G105418 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 1788390 ~ 1789725 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106604668 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU118854 | False | 436 | lncRNA | 0.36 | 2 | 1788390 | 1789725 |
| TU118855 | True | 607 | lncRNA | 0.43 | 3 | 1788893 | 1789725 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| zdhhc3a | zdhhc3 | coding | downstream | 56057 | 1709516 ~ 1732333 (-) |
| kiaa1143 | k1143 | coding | downstream | 83527 | 1702951 ~ 1704863 (-) |
| LOC110515405 | LOC106590999 | coding | downstream | 104901 | 1573402 ~ 1683489 (-) |
| LOC110515934 | gadl1 | coding | downstream | 331257 | 1427251 ~ 1457133 (-) |
| LOC118937319 | NA | coding | downstream | 472145 | 1314565 ~ 1316245 (-) |
| nrsn1 | nrsn1 | coding | upstream | 131285 | 1921010 ~ 1925939 (-) |
| LOC118937333 | NA | coding | upstream | 512911 | 2302636 ~ 2303881 (-) |
| LOC118937335 | NA | coding | upstream | 640550 | 2273420 ~ 2440302 (-) |
| sox4b | sox4 | coding | upstream | 656649 | 2446374 ~ 2449761 (-) |
| LOC110512766 | LOC106593784 | coding | upstream | 723985 | 2513710 ~ 2516419 (-) |
| G105409 | NA | non-coding | downstream | 11403 | 1775935 ~ 1776987 (-) |
| G105406 | NA | non-coding | downstream | 24107 | 1762315 ~ 1764283 (-) |
| G105402 | NA | non-coding | downstream | 31449 | 1756403 ~ 1756941 (-) |
| G105394 | NA | non-coding | downstream | 51415 | 1736702 ~ 1736975 (-) |
| G105386 | NA | non-coding | downstream | 80487 | 1707563 ~ 1707903 (-) |
| G105361 | NA | non-coding | upstream | 9941 | 1799666 ~ 1799990 (-) |
| G105360 | NA | non-coding | upstream | 11592 | 1801317 ~ 1805294 (-) |
| G105364 | NA | non-coding | upstream | 16061 | 1805786 ~ 1806068 (-) |
| G105365 | NA | non-coding | upstream | 16466 | 1806191 ~ 1806427 (-) |
| G105423 | NA | non-coding | upstream | 23209 | 1812934 ~ 1813224 (-) |
| G105340 | NA | other | downstream | 146658 | 1641267 ~ 1641732 (-) |
| G105285 | NA | other | downstream | 246684 | 1540730 ~ 1541706 (-) |
| G105220 | NA | other | downstream | 446055 | 1333986 ~ 1342335 (-) |
| G105427 | NA | other | upstream | 122867 | 1912592 ~ 1917188 (-) |
| G105428 | NA | other | upstream | 127626 | 1917351 ~ 1918027 (-) |
| G105492 | NA | other | upstream | 168759 | 1958484 ~ 1961587 (-) |
| G105636 | NA | other | upstream | 328354 | 2118079 ~ 2120501 (-) |
| G105938 | NA | other | upstream | 573274 | 2362999 ~ 2363531 (-) |
