G105039


Basic Information

Item Value
gene id G105039
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 1799673 ~ 1799993 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU118280
AGAATAGAACCAGCTGTGTATAAGGCTTTAAGGGAAGACAGAATAGAACCAGCAGTGTATAAGGCTTTAAGGGAAGACAGAATAGAACCAGCTGTGTATAAGGCTTTAAGGGAAGACAGAATAGAACCAGCAGTGTATAAGGCTTTAAGGGAAGACAGAATAGAACCAGCTGTGTATAAGGCTTTAAGGGAAGACAGAATAGAACCAGCTGTGTATAAGGCTTTAAGGGAAGACAGAATAGAACCAGCAGTGTATAAGGCTTTAAGGGAATACAGAATAGAACCAGCTGTGTATAAGGCTTTAAGGGAAGACAGAATAGAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU118280 True 321 lncRNA 0.40 1 1799673 1799993

Neighbor

gene id symbol gene type direction distance location
LOC110514512 LOC105016610 coding upstream 4735 1745298 ~ 1794938 (+)
tmem42a LOC106595323 coding upstream 91998 1704889 ~ 1707675 (+)
gpd1l LOC105023484 coding upstream 101304 1683561 ~ 1698369 (+)
LOC118937325 NA coding upstream 192900 1605140 ~ 1606773 (+)
LOC118937328 NA coding upstream 210305 1588820 ~ 1589368 (+)
slc6a3 slc6a3 coding downstream 16815 1816808 ~ 1853570 (+)
LOC110511503 LOC106605726 coding downstream 65372 1865365 ~ 1901456 (+)
LOC110516539 NA coding downstream 316560 2116553 ~ 2120455 (+)
LOC118944029 NA coding downstream 366128 2166121 ~ 2177996 (+)
LOC118944030 NA coding downstream 618193 2418186 ~ 2420621 (+)
G105043 NA non-coding upstream 349 1798498 ~ 1799324 (+)
G105111 NA non-coding upstream 28641 1766809 ~ 1771032 (+)
G105107 NA non-coding upstream 42476 1756381 ~ 1757197 (+)
G105091 NA non-coding upstream 76982 1721995 ~ 1722691 (+)
G105030 k1143 non-coding upstream 94827 1702955 ~ 1704846 (+)
G105041 NA non-coding downstream 5703 1805696 ~ 1806063 (+)
G105033 NA non-coding downstream 6910 1806903 ~ 1807667 (+)
G105115 NA non-coding downstream 10083 1810076 ~ 1810305 (+)
G105116 NA non-coding downstream 11588 1811581 ~ 1811808 (+)
G105130 NA non-coding downstream 34621 1834614 ~ 1835116 (+)
G105042 NA other upstream 89116 1708969 ~ 1710557 (+)
G105036 NA other upstream 99242 1699073 ~ 1700431 (+)
tgfbr2b LOC106606173 other upstream 446810 1309202 ~ 1390936 (+)
G104761 NA other upstream 645924 1153061 ~ 1153749 (+)
cmc1 cc068 other upstream 927158 860459 ~ 872515 (+)
G106019 NA other downstream 720723 2520716 ~ 2527972 (+)
G106122 NA other downstream 917968 2717961 ~ 2718525 (+)
G106240 NA other downstream 1174830 2974823 ~ 3039475 (+)
G106253 cdkal other downstream 1406804 3006312 ~ 3391033 (+)
mboat1 LOC106573215 other downstream 1567212 3350582 ~ 3487129 (+)

Expression


Co-expression Network