G105360


Basic Information

Item Value
gene id G105360
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 1801317 ~ 1805294 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU118787
ACCTGTCCAATAGACCTCTATAGTAACAAACACCTGTCCAATAGACCTCTATAGTAACAAACACCTGTCCAATAGACCTCTATAGTAACATTCAGGTGATTAACAGTGGATAGATCGACAGGCTaggtcccagatggcaccctattccctatatagtgcactactttagaccagagccctattccctatatagtgcactactttagaccagagccctattccctatatagagcactactatagaccagggccctattccctatatagtgcactactttagaccagggccctattccctacatagagcactacattagaccagagccctattccctatatagagcactacattagaccagagccctattccctatatagagcactacattagaccagagccctaatccctatatagagcactactttagaccagggccctattccctatatagagcactactttagaccagagccctattccctatatagagcactacattagaccagggccctattccctatatagagcactacattagaccagagctctactccctatatagagcactacattagaccagagccctattccctatatagagcactactttagaccagggccctattccctatatagagcactacattagaccagagccctattccctatatagagcactactatagaccagggccctattccctatatagtgcactactttagaccagggccctattccctacatagagcactacattagaccagagccctattccctatatagagcactacattagaccagagccctattccctatatagagcactacattagaccagagccctaatccctatatagagcactactttagaccagggccctattccctatatagagcactactttagaccagagccctattccctatatagagcactacattagaccagggccctattccctatatagagcactacattagaccagagctctactccctatatagagcactacattagaccagagccctattccctatatagagcactactttagaccagggccctattccctatatagagcactacattagaccagagccctattccctatatagagcactacattagaccagagccctatggacacAGATTCATGTAACTAACGCAGAACGCATTACAATGACTCCATCTGTCGGGAGACAACGTATTAACCAAGGAGAAATACAGTCTTCCTTGGTCTTTCCATCCAGCAGACATTTCTACCAGCAAGTCTAGTCTACCGACAGTAATATTTACCCTCAACAAAAAAAGATTGTCCAATTGTCCACAACTGATTGAAAAGAGCAACACATTTCAGAGAAAGTTAAGAATTAAAAACAGCTTTTGAAATAAAAATCCACGACTCAGTGAGTTAAAACACCTACGATAAGTGATTATATTAATCCACAGGGCAAAATTAGGCATTCAAAGTGTTAGGAATTTCTCATTTCTTAAATAACTATTTAAAACTCTTCATGAGACGGTCTTAATGGAGCGGTTTGATGTGGTGCCATAACAGTAGAACAACCACAGAAGAGAAAACCATCAGAAGTCACCCGGTGTGTTTCAGGAAGTTGATAATACGTGGAGcgcattaaaaataaataaacatttaaataatGAGAGTATTTATAATTTCTACACAGAATTACGTGTGAGTGGTGTACCTCCCAACGGAGAAAtaaacagaccccccccccccaccagctaGTTGGACCTTTACTAGTTGTTGATAGTGCATTAATCACAAtcacatcacaatatcccataatgacatcacaatatcccataatgacatcacaataccccataatgacatcacaataccccataatgacgaggagaaaacaggtttttagaaatgtttgctaatttattagaAATAAAAACCAGAAAaacccttatttacataattattcagaccctttgctatgagagactcaaaattgagctcaggtgcgcgTGTGcgtcaattgatcatccttgagatgtttctacaacttgagtccacctgtggtaaattcaatggattggacattatttggaaaggcacagaggtcccacagttgacagtgcatgtcagagcaaaaaccaagcaaagAGGTCggaggaattgtctgtagagctccgagacaggattgtgtcgaggcacagatctggggaagggtaccaaaacatttccgcagcattgaaggttcccaagaacacagtggcctccttcattcttaaatggaagaagtttggaaccaccaagactcttcctagagctggccgcccggccaaactgagcaatcggaggataagggccttggtcagggaggtgaccaagaacccgatggtcactctgaaagagctccagagttcttctgtggagagggaagaaccttccagaaggacaaccatctctgcagcactccatcaatcaggcctttatggtaaagaggccagacggaagccactcctcagtaaaaggtacatgacagcccgcttggagtttgccaaaaggccccaaaaggactcgcagaccatgagaaaccatgagaaacaaaattatctggtctgatgaaaccaagattgaactctttggcctgaatgactattatcacgtctggaggaaacctggcaccatccctacggtgaagcatggtgccggcagcatcaagctgtggggatgtttttcagcggcaggactgggagactagtcaggatcaaggcaaagatgaacagagcaaagtacagagaaatccttgatgaaaacctgctccagagcgctcaggacctcagactggggcgaaggttcaccttccaacaggacaatgaccccaagacagcgtaggagtggcttcgggacaagtctctgaatgtccttgagtggcccagccagagcctggacctgaacctgatcgaacatctctggagagacctgaaaatagctgtgcagtgacgctccccatccaacctgatggagcttgagaggatctgcagagaggaatgggagaaactccccaaatacaggtgtgccaagcttgtagtgtcataaccaagaagaccggaggctgtaatcgctgccaaatgtgcttcaacaaagtactgagtaaagggtctgaatacttatgtaaatgtgatatttcagtttaatttatatatataaatttgcaaacatttctaaaaacctgtttttgctttgtcattatgaggtattgtgatgtcattatggtgtattgtgatgtcattatgaggtattgtgatgtcattatgaggtattgtgatgtcattatggtgtattgtgtgtagattgatgaggggggaaaaaactatttaatcaattttggaataaggctgaaacttaccaaaatgtgtaaaaagtcaaggggtctgaatactttcagaaggcgcTGTACATGAGATAAAATAAGGAGACATAACTGACCGCAGTGATGCTGAAAGTCCTATTTAATCTATCTACCCAACCCCAGGAGATAAAATAAGGAGACATAACTGACCTCAGTGATGCTGAAAGTCCTATTTAATCTATCTACCCAACCCCAGGAGATAAAATAAGGAGACATAACTGACCGCAGTGATGCTGAAAGTCCTATTTAATCTATCTACCCAACCCCAGGAGATAAAATAAGGAGACATACCTGACCTCAGTGATGCTGAAAGTCCTATTTAATCTATCTACCCAACCCCAGGAGATAAAATAAGGAGACATAACTGACCTCAGTGATGCTGAAAGTCATATTTAATCTATCTACCCAACCCCAGGAGATAAAATAAGGAGACATAACTGACCTCAGTGATGCTGAAAGTCCTATTTAATCTATCTACCCAACCCCAGGAGATAAAATAAGGAGACATAACTGACCTCAG

Function

NR:

description
TC1-like transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU118787 True 3915 lncRNA 0.43 2 1801317 1805294

Neighbor

gene id symbol gene type direction distance location
zdhhc3a zdhhc3 coding downstream 68984 1709516 ~ 1732333 (-)
kiaa1143 k1143 coding downstream 96454 1702951 ~ 1704863 (-)
LOC110515405 LOC106590999 coding downstream 117828 1573402 ~ 1683489 (-)
LOC110515934 gadl1 coding downstream 344184 1427251 ~ 1457133 (-)
LOC118937319 NA coding downstream 485072 1314565 ~ 1316245 (-)
nrsn1 nrsn1 coding upstream 115716 1921010 ~ 1925939 (-)
LOC118937333 NA coding upstream 497342 2302636 ~ 2303881 (-)
LOC118937335 NA coding upstream 624981 2273420 ~ 2440302 (-)
sox4b sox4 coding upstream 641080 2446374 ~ 2449761 (-)
LOC110512766 LOC106593784 coding upstream 708416 2513710 ~ 2516419 (-)
G105361 NA non-coding downstream 1327 1799666 ~ 1799990 (-)
G105418 NA non-coding downstream 11592 1788390 ~ 1789725 (-)
G105409 NA non-coding downstream 24330 1775935 ~ 1776987 (-)
G105406 NA non-coding downstream 37034 1762315 ~ 1764283 (-)
G105402 NA non-coding downstream 44376 1756403 ~ 1756941 (-)
G105364 NA non-coding upstream 492 1805786 ~ 1806068 (-)
G105365 NA non-coding upstream 897 1806191 ~ 1806427 (-)
G105423 NA non-coding upstream 7640 1812934 ~ 1813224 (-)
G105425 NA non-coding upstream 11576 1816870 ~ 1817281 (-)
G105431 NA non-coding upstream 12831 1818125 ~ 1818345 (-)
G105340 NA other downstream 159585 1641267 ~ 1641732 (-)
G105285 NA other downstream 259611 1540730 ~ 1541706 (-)
G105220 NA other downstream 458982 1333986 ~ 1342335 (-)
G105427 NA other upstream 107298 1912592 ~ 1917188 (-)
G105428 NA other upstream 112057 1917351 ~ 1918027 (-)
G105492 NA other upstream 153190 1958484 ~ 1961587 (-)
G105636 NA other upstream 312785 2118079 ~ 2120501 (-)
G105938 NA other upstream 557705 2362999 ~ 2363531 (-)

Expression

G105360 Expression in all Baseline Samples

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G105360 Expression in each Bioproject

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G105360 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 150.
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Co-expression Network