XLOC_020783 (zgc:194627)


Basic Information

Item Value
gene id XLOC_020783
gene name zgc:194627
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 5433093 ~ 5441893 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00040978
aatgaataagcactagtatctaatgaacaaGTACTAGTAACGTGAAAATAGAACTAGTACGGGTTATAGATTAAATGTCAATACGGCTTGCCATAActctacccccagtgacatcactcgtagaagaagtgcaaaaaaggtggagctcaagctccccctcgctggagttcagctcgcccaaatggctctgcagcgagcatcACTTGTTCAGACCTGGGGATTCAGgagagagaagtcctcctcatttatcgtgtttatataaacatgatcttATATGTAACAGGGCATTAACTTATTTACGGTTTATTTCTATGCATTTTAACTTTTCTGATTTAAGTCTGTTCTTGTGAGCCAACTGTATGTTGTTCGCCCTCCTTTCTCCCAGACCACTCCCACCTCTGCCATGCGCTCCACTCATATCTGGATGCATTGTTTAAAAACTTAACCTAACGGAGATAAGGGAGGGGCGGCGGGGGGTACACCTTGCAACTGTATTAAAATTCAAGTGCAGCATGTTCAACGGCTTACTGAGACGGATTACACGCAGGCTGCAATATGTACCGATGCCTTTTCATCTGTCTATTGGTACCTTCTATAGATGCAGCGTCTCTGCATCAGGTAGTTGAAAGCACTGAAGGAGACTCCATCATCTTACCATGCACCCACAAAAGAATCACACATGAAGGAAAACCACTGACAGTCCACTGGAGACACAACGACACCAGGAACGTGTACGATATCATCCACAGCAGAAACTCTGTAAAGGAACAACATCCAGCATACAACAGCAGAGCTGAAGTGTTAGATGAGCGACTGGAGAAGGGCCACATTGAACTCAAACTCACCAACCTGCAGCTCTCCGACACTGGAACGTACCTGTGCTTCGTCCCCGATGCCAGAGTTGAACACAGTACACAGCTGCTGGTCAAAGAAAGAAAATTACCTGAATACACAGCAATTCAATTAAGAAGCCACGGCACAGAAACAACACTAGGCAGAACTCTCCACATCATTATTCCTCTATCTGGACTCATTCTGCATTACTTATGA

Function

symbol description
zgc:194627 Predicted to enable signaling receptor binding activity. Predicted to be involved in T cell receptor signaling pathway and regulation of cytokine production. Predicted to be active in external side of plasma membrane.

GO:

id name namespace
GO:0001817 regulation of cytokine production biological_process
GO:0050776 regulation of immune response biological_process
GO:0050852 T cell receptor signaling pathway biological_process
GO:0009897 external side of plasma membrane cellular_component
GO:0005102 signaling receptor binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-081022-132 Predicted to enable signaling receptor binding activity. Predicted to be involved in T cell receptor signaling pathway and regulation of cytokine production. Predicted to be active in external side of plasma membrane.

Ensembl:

ensembl_id ENSDARG00000102594

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00040978 True 1050 mRNA 0.45 4 5433093 5441893

Neighbor

gene id symbol gene type direction distance location
XLOC_020782 s1pr4 coding downstream 109611 5320415 ~ 5323482 (-)
XLOC_020781 NA coding downstream 117504 5312971 ~ 5315589 (-)
XLOC_020780 NA coding downstream 158131 5267523 ~ 5274962 (-)
XLOC_020779 ncln coding downstream 181081 5233396 ~ 5252012 (-)
XLOC_020778 tnfaip8l1 coding downstream 261264 5153461 ~ 5171829 (-)
XLOC_020784 NA coding upstream 11350 5453243 ~ 5463115 (-)
XLOC_020785 CABZ01064972.1 coding upstream 41695 5483588 ~ 5518117 (-)
XLOC_020786 CABZ01064968.1 coding upstream 76421 5518314 ~ 5529241 (-)
XLOC_020787 zgc:171601 coding upstream 107841 5549734 ~ 5553007 (-)
XLOC_020788 NA coding upstream 182480 5624373 ~ 5631081 (-)
XLOC_020777 CR936300.1 non-coding downstream 288071 5140530 ~ 5145022 (-)
XLOC_020765 NA non-coding downstream 579278 4853062 ~ 4853815 (-)
XLOC_020756 NA non-coding downstream 697756 4733007 ~ 4735337 (-)
XLOC_020792 NA non-coding upstream 259367 5701260 ~ 5724131 (-)
XLOC_020793 NA non-coding upstream 281435 5723328 ~ 5825199 (-)
XLOC_020795 BX005329.2 non-coding upstream 303410 5745303 ~ 5749450 (-)

Expression


Co-expression Network