G105122


Basic Information

Item Value
gene id G105122
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 1854017 ~ 1854230 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU118389
TCTTTGATGCTATGGGACTAaattgcttccactggtcctgggatcCTTCGTTAAGGTCAACAGTATCATGATCTCTACCCAGAACCAAGACATTTTATCCAAAAACCCTCGTTGTCTCTGttaggaggctgaaacttggtcACAAGTAGATCTTCcggcaagacaataaccccaagcacacatcaaaatccacaaagaaatgattcattggcca

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU118389 True 214 lncRNA 0.43 1 1854017 1854230

Neighbor

gene id symbol gene type direction distance location
slc6a3 slc6a3 coding upstream 447 1816808 ~ 1853570 (+)
LOC110514512 LOC105016610 coding upstream 59079 1745298 ~ 1794938 (+)
tmem42a LOC106595323 coding upstream 146342 1704889 ~ 1707675 (+)
gpd1l LOC105023484 coding upstream 155648 1683561 ~ 1698369 (+)
LOC118937325 NA coding upstream 247244 1605140 ~ 1606773 (+)
LOC110511503 LOC106605726 coding downstream 11135 1865365 ~ 1901456 (+)
LOC110516539 NA coding downstream 262323 2116553 ~ 2120455 (+)
LOC118944029 NA coding downstream 311891 2166121 ~ 2177996 (+)
LOC118944030 NA coding downstream 563956 2418186 ~ 2420621 (+)
LOC118937340 NA coding downstream 1124006 2978236 ~ 2978524 (+)
G105130 NA non-coding upstream 18901 1834614 ~ 1835116 (+)
G105116 NA non-coding upstream 42209 1811581 ~ 1811808 (+)
G105115 NA non-coding upstream 43712 1810076 ~ 1810305 (+)
G105033 NA non-coding upstream 46350 1806903 ~ 1807667 (+)
G105041 NA non-coding upstream 47954 1805696 ~ 1806063 (+)
G105119 NA non-coding downstream 79 1854309 ~ 1854718 (+)
G105121 NA non-coding downstream 930 1855160 ~ 1855480 (+)
G105120 NA non-coding downstream 1354 1855584 ~ 1857117 (+)
G105136 NA non-coding downstream 7006 1861236 ~ 1861734 (+)
G105148 NA non-coding downstream 30605 1884835 ~ 1885274 (+)
G105042 NA other upstream 143460 1708969 ~ 1710557 (+)
G105036 NA other upstream 153586 1699073 ~ 1700431 (+)
tgfbr2b LOC106606173 other upstream 501154 1309202 ~ 1390936 (+)
G104761 NA other upstream 700268 1153061 ~ 1153749 (+)
cmc1 cc068 other upstream 981502 860459 ~ 872515 (+)
G106019 NA other downstream 666486 2520716 ~ 2527972 (+)
G106122 NA other downstream 863731 2717961 ~ 2718525 (+)
G106240 NA other downstream 1120593 2974823 ~ 3039475 (+)
G106253 cdkal other downstream 1352567 3006312 ~ 3391033 (+)
mboat1 LOC106573215 other downstream 1512975 3350582 ~ 3487129 (+)

Expression


Co-expression Network