G105121


Basic Information

Item Value
gene id G105121
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 1855160 ~ 1855480 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU118388
ggtttggccggtgtaggccgtcattgtaaataagaatttgctcttaacccTAGTTCAATTCAAAAACATATATATTAAATAGAAGCTTGACTTAAATAAATTCCAGAAGGACAGTCTTTGAAAAGATAGTCCAATCTTCAAAACTCtaaaatctctctctttctttaaaaAAGTGATCGCAATATGTACGACTTTCAAGACAGCCCCTAAGATAACATGCTAGTTGTCTCAAGCCCTGTGTTCCATTTATCCAATAAATATGACCAATACAGTTCATTATTAATACGACGGACAGTtagaaaaacatacatttttgtcccT

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU118388 True 321 lncRNA 0.34 1 1855160 1855480

Neighbor

gene id symbol gene type direction distance location
slc6a3 slc6a3 coding upstream 1590 1816808 ~ 1853570 (+)
LOC110514512 LOC105016610 coding upstream 60222 1745298 ~ 1794938 (+)
tmem42a LOC106595323 coding upstream 147485 1704889 ~ 1707675 (+)
gpd1l LOC105023484 coding upstream 156791 1683561 ~ 1698369 (+)
LOC118937325 NA coding upstream 248387 1605140 ~ 1606773 (+)
LOC110511503 LOC106605726 coding downstream 9885 1865365 ~ 1901456 (+)
LOC110516539 NA coding downstream 261073 2116553 ~ 2120455 (+)
LOC118944029 NA coding downstream 310641 2166121 ~ 2177996 (+)
LOC118944030 NA coding downstream 562706 2418186 ~ 2420621 (+)
LOC118937340 NA coding downstream 1122756 2978236 ~ 2978524 (+)
G105119 NA non-coding upstream 442 1854309 ~ 1854718 (+)
G105122 NA non-coding upstream 930 1854017 ~ 1854230 (+)
G105130 NA non-coding upstream 20044 1834614 ~ 1835116 (+)
G105116 NA non-coding upstream 43352 1811581 ~ 1811808 (+)
G105115 NA non-coding upstream 44855 1810076 ~ 1810305 (+)
G105120 NA non-coding downstream 104 1855584 ~ 1857117 (+)
G105136 NA non-coding downstream 5756 1861236 ~ 1861734 (+)
G105148 NA non-coding downstream 29355 1884835 ~ 1885274 (+)
G105151 NA non-coding downstream 34443 1889923 ~ 1890287 (+)
G105152 NA non-coding downstream 35986 1891466 ~ 1891948 (+)
G105042 NA other upstream 144603 1708969 ~ 1710557 (+)
G105036 NA other upstream 154729 1699073 ~ 1700431 (+)
tgfbr2b LOC106606173 other upstream 502297 1309202 ~ 1390936 (+)
G104761 NA other upstream 701411 1153061 ~ 1153749 (+)
cmc1 cc068 other upstream 982645 860459 ~ 872515 (+)
G106019 NA other downstream 665236 2520716 ~ 2527972 (+)
G106122 NA other downstream 862481 2717961 ~ 2718525 (+)
G106240 NA other downstream 1119343 2974823 ~ 3039475 (+)
G106253 cdkal other downstream 1351317 3006312 ~ 3391033 (+)
mboat1 LOC106573215 other downstream 1511725 3350582 ~ 3487129 (+)

Expression


Co-expression Network