G105120


Basic Information

Item Value
gene id G105120
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 1855584 ~ 1857117 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU118387
CcctgaatagggaatagggtgcatacAACATTATAGTTTTAGTGCAATACTGTAGTGCACTAGAATCCAAGTAAACCAAAGACAATTGAAGTGGACACAGAGCTATATATAACGAGGGGGGTTTATATAGTTCTGTTTCTCTATATTCTCTGTACGGGTAACTTGTACAAggtgtgaaatatatatattgtttttgcaTATCTCATTCCCCTGAGAGTGAGCAGAACAAAATATTTTCACCTTGTCGTCTCGGGGGATTCGATCCGGAAAATCTTTCAATTGCCCAAACGCTCCTAatccaccaggctacctgcctgaTCTATGGTTCCCCTGTTACAGAGATAATATACAGTTAATGAAGATGTCTTATTGACTGGCACAACGCCTCTATTTGGCCTAGATcatctgtgtgtttgtattgatttGTGTGTGCCTTTTTTCAAATGtttgtagttctgtccttgatctgttcttgtctattaatgttctttattatgtcatgttctgtgtggactggcccaggaagagtagctgctgctttagcagtaactaatggagatcctaataaaacacCAAGATGTGTTGGGTAACATGGCCATAGCTCTCCATCGTATGTCTCTTAAACAAGCTATTTGGAAACAGAAACAGCTAACAGCCAATTATCTGAATGTCTCTACAAAGGACATCAGGTTTAATTGTTAACAGGAAAGTGTTAAAATATTCAATACTGTTTAAAAAcagcttttattttattttaaatgacaTATGTACTGTGATCTATTACGTGTATTCTGTATACTCTATTTGTGTAATTTAAATGTATCTTTTAGAGGGGCTTCTATTGTCTTGAGATGGTATCAAATGTAACTTTTAGAGGGGCTTGTATTGTCTTGAGATGGTATCAAATGTAACATTTAGAGGGGCTTGTATTGTCTTGAGATGGTATCAAATGTAACCAATAGAGGGGCTTGTATTGTCTTGAGATGGTATCAAATGTAACCAATAGAGGGGCTTCTATTGTCTTGAGATGGTATTAAATGTATATTTTAGAGGGGCTTCTATTGTCTTGAGATGGTATTAAATGTAACCAATAGAGGGGCTTGTATTGTCTTGAGATGGTATCAAATGTAACCAATAGAGGGGCTTGTATTGTCTTGAGATGGTATCAAATGTAACCAATAGAGGGGCTTCTATTGTCTTGAGATGGTATTAAATGTATATTTTAGAGGGGCTTCTATTGTCTTGAGATGGTATCAAATgtaaccaaccctaaccctaACTCTAGACCTTATCTGACAGTCAAACTGTCAATACACTGTTCTGCTTCCCTTCAACAACAACTCTTCAGGCAAACACGGGCTGCAGACAATTCTGTTTGATCTGTACAAAATGGCTACCTGAAATAGGTTTTCTCTTTAAGACGAAGATAGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU118387 True 1432 lncRNA 0.37 2 1855584 1857117

Neighbor

gene id symbol gene type direction distance location
slc6a3 slc6a3 coding upstream 2014 1816808 ~ 1853570 (+)
LOC110514512 LOC105016610 coding upstream 60646 1745298 ~ 1794938 (+)
tmem42a LOC106595323 coding upstream 147909 1704889 ~ 1707675 (+)
gpd1l LOC105023484 coding upstream 157215 1683561 ~ 1698369 (+)
LOC118937325 NA coding upstream 248811 1605140 ~ 1606773 (+)
LOC110511503 LOC106605726 coding downstream 8248 1865365 ~ 1901456 (+)
LOC110516539 NA coding downstream 259436 2116553 ~ 2120455 (+)
LOC118944029 NA coding downstream 309004 2166121 ~ 2177996 (+)
LOC118944030 NA coding downstream 561069 2418186 ~ 2420621 (+)
LOC118937340 NA coding downstream 1121119 2978236 ~ 2978524 (+)
G105121 NA non-coding upstream 104 1855160 ~ 1855480 (+)
G105119 NA non-coding upstream 866 1854309 ~ 1854718 (+)
G105122 NA non-coding upstream 1354 1854017 ~ 1854230 (+)
G105130 NA non-coding upstream 20468 1834614 ~ 1835116 (+)
G105116 NA non-coding upstream 43776 1811581 ~ 1811808 (+)
G105136 NA non-coding downstream 4119 1861236 ~ 1861734 (+)
G105148 NA non-coding downstream 27718 1884835 ~ 1885274 (+)
G105151 NA non-coding downstream 32806 1889923 ~ 1890287 (+)
G105152 NA non-coding downstream 34349 1891466 ~ 1891948 (+)
G105042 NA other upstream 145027 1708969 ~ 1710557 (+)
G105036 NA other upstream 155153 1699073 ~ 1700431 (+)
tgfbr2b LOC106606173 other upstream 502721 1309202 ~ 1390936 (+)
G104761 NA other upstream 701835 1153061 ~ 1153749 (+)
cmc1 cc068 other upstream 983069 860459 ~ 872515 (+)
G106019 NA other downstream 663599 2520716 ~ 2527972 (+)
G106122 NA other downstream 860844 2717961 ~ 2718525 (+)
G106240 NA other downstream 1117706 2974823 ~ 3039475 (+)
G106253 cdkal other downstream 1349680 3006312 ~ 3391033 (+)
mboat1 LOC106573215 other downstream 1510088 3350582 ~ 3487129 (+)

Expression


Co-expression Network