Gene
RNA
| Item | Value |
|---|---|
| gene id | G105136 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 1861236 ~ 1861734 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU118430 | False | 258 | lncRNA | 0.37 | 3 | 1861236 | 1861734 |
| TU118431 | False | 356 | lncRNA | 0.38 | 2 | 1861236 | 1861734 |
| TU118432 | False | 260 | lncRNA | 0.38 | 3 | 1861236 | 1861734 |
| TU118434 | True | 211 | lncRNA | 0.30 | 2 | 1861236 | 1861734 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| slc6a3 | slc6a3 | coding | upstream | 7666 | 1816808 ~ 1853570 (+) |
| LOC110514512 | LOC105016610 | coding | upstream | 66298 | 1745298 ~ 1794938 (+) |
| tmem42a | LOC106595323 | coding | upstream | 153561 | 1704889 ~ 1707675 (+) |
| gpd1l | LOC105023484 | coding | upstream | 162867 | 1683561 ~ 1698369 (+) |
| LOC118937325 | NA | coding | upstream | 254463 | 1605140 ~ 1606773 (+) |
| LOC110511503 | LOC106605726 | coding | downstream | 3631 | 1865365 ~ 1901456 (+) |
| LOC110516539 | NA | coding | downstream | 254819 | 2116553 ~ 2120455 (+) |
| LOC118944029 | NA | coding | downstream | 304387 | 2166121 ~ 2177996 (+) |
| LOC118944030 | NA | coding | downstream | 556452 | 2418186 ~ 2420621 (+) |
| LOC118937340 | NA | coding | downstream | 1116502 | 2978236 ~ 2978524 (+) |
| G105120 | NA | non-coding | upstream | 4119 | 1855584 ~ 1857117 (+) |
| G105121 | NA | non-coding | upstream | 5756 | 1855160 ~ 1855480 (+) |
| G105119 | NA | non-coding | upstream | 6518 | 1854309 ~ 1854718 (+) |
| G105122 | NA | non-coding | upstream | 7006 | 1854017 ~ 1854230 (+) |
| G105130 | NA | non-coding | upstream | 26120 | 1834614 ~ 1835116 (+) |
| G105148 | NA | non-coding | downstream | 23101 | 1884835 ~ 1885274 (+) |
| G105151 | NA | non-coding | downstream | 28189 | 1889923 ~ 1890287 (+) |
| G105152 | NA | non-coding | downstream | 29732 | 1891466 ~ 1891948 (+) |
| G105158 | NA | non-coding | downstream | 40578 | 1902312 ~ 1903179 (+) |
| G105042 | NA | other | upstream | 150679 | 1708969 ~ 1710557 (+) |
| G105036 | NA | other | upstream | 160805 | 1699073 ~ 1700431 (+) |
| tgfbr2b | LOC106606173 | other | upstream | 508373 | 1309202 ~ 1390936 (+) |
| G104761 | NA | other | upstream | 707487 | 1153061 ~ 1153749 (+) |
| cmc1 | cc068 | other | upstream | 988721 | 860459 ~ 872515 (+) |
| G106019 | NA | other | downstream | 658982 | 2520716 ~ 2527972 (+) |
| G106122 | NA | other | downstream | 856227 | 2717961 ~ 2718525 (+) |
| G106240 | NA | other | downstream | 1113089 | 2974823 ~ 3039475 (+) |
| G106253 | cdkal | other | downstream | 1345063 | 3006312 ~ 3391033 (+) |
| mboat1 | LOC106573215 | other | downstream | 1505471 | 3350582 ~ 3487129 (+) |
