XLOC_020784



Basic Information


Item Value
gene id XLOC_020784
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 5453243 ~ 5463115 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00041935
ATGTGGAGAAGTGTTGTGATGGTCTTCTCCAGCATCTCTGAGGGTCTGGTCCTCCTTCACCAGCCCACAGAATCCCCAGCTGAAGATGTTAATCCTGCACCAGCAGTAGTCTTCTCCATATTTAGCACACTTGCTGTCGGCTCGGCACTGTCTGCCCCAGTAGTCCACGTTCTCCTGAGGTGAACAGTACATGCTTTGGCTCTTTCCGTCTTCATCGGTGCTCTTGCACTTGTATTCGCCGCCGTCAGGCTTGCAGTCTTCTGCGCACAGCGTGCCGAGATGAGTAAAGAAAGTTTTCCCTTCACTCAGACACGGTGAACAGAAGAGcaggaggagaaagagagagactcgCAGACGCTCCATTCTTTCTGTCCAGAGGAGAATAAATGAAGTTTAGAGTCAGTGGAAGCATTAACCATTGTGTGGTGTTCGTATTTTGGTTACTGAGCCAGTGTTCATGCGTCTGGTGCACCCGCTAGAGTTTTGGCTTTCCAAATTAACACCATCAAACAATTTAGTGTTAAATTACTCAACAAATGTTTACTTAATCCCAATTACAAGCCATATGCACTGCAAACATGGTTAATTTTCCCTTTTACGTTTGTTCTGAGCTAGCAATTTTACTATACTG

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00041935 True 631 lncRNA 0.46 2 5453243 5463115

Neighbor


gene id symbol gene type direction distance location
XLOC_020783 zgc:194627 coding downstream 11350 5433093 ~ 5441893 (-)
XLOC_020782 s1pr4 coding downstream 129761 5320415 ~ 5323482 (-)
XLOC_020781 NA coding downstream 137654 5312971 ~ 5315589 (-)
XLOC_020780 NA coding downstream 178281 5267523 ~ 5274962 (-)
XLOC_020779 ncln coding downstream 201231 5233396 ~ 5252012 (-)
XLOC_020785 CABZ01064972.1 coding upstream 20473 5483588 ~ 5518117 (-)
XLOC_020786 CABZ01064968.1 coding upstream 55199 5518314 ~ 5529241 (-)
XLOC_020787 zgc:171601 coding upstream 86619 5549734 ~ 5553007 (-)
XLOC_020788 NA coding upstream 161258 5624373 ~ 5631081 (-)
XLOC_020789 mcm2 coding upstream 168914 5632029 ~ 5655680 (-)
XLOC_020777 CR936300.1 non-coding downstream 308221 5140530 ~ 5145022 (-)
XLOC_020765 NA non-coding downstream 599428 4853062 ~ 4853815 (-)
XLOC_020756 NA non-coding downstream 717906 4733007 ~ 4735337 (-)
XLOC_020792 NA non-coding upstream 238145 5701260 ~ 5724131 (-)
XLOC_020793 NA non-coding upstream 260213 5723328 ~ 5825199 (-)
XLOC_020795 BX005329.2 non-coding upstream 282188 5745303 ~ 5749450 (-)
XLOC_020798 NA non-coding upstream 397025 5860140 ~ 5872272 (-)

Expression



Co-expression Network