Gene
RNA
| Item | Value |
|---|---|
| gene id | G105159 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 1903431 ~ 1903890 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU118467 | True | 460 | lncRNA | 0.36 | 1 | 1903431 | 1903890 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110511503 | LOC106605726 | coding | upstream | 1983 | 1865365 ~ 1901456 (+) |
| slc6a3 | slc6a3 | coding | upstream | 49861 | 1816808 ~ 1853570 (+) |
| LOC110514512 | LOC105016610 | coding | upstream | 108493 | 1745298 ~ 1794938 (+) |
| tmem42a | LOC106595323 | coding | upstream | 195756 | 1704889 ~ 1707675 (+) |
| gpd1l | LOC105023484 | coding | upstream | 205062 | 1683561 ~ 1698369 (+) |
| LOC110516539 | NA | coding | downstream | 212663 | 2116553 ~ 2120455 (+) |
| LOC118944029 | NA | coding | downstream | 262231 | 2166121 ~ 2177996 (+) |
| LOC118944030 | NA | coding | downstream | 514296 | 2418186 ~ 2420621 (+) |
| LOC118937340 | NA | coding | downstream | 1074346 | 2978236 ~ 2978524 (+) |
| LOC118937337 | NA | coding | downstream | 1074896 | 2978786 ~ 2980193 (+) |
| G105158 | NA | non-coding | upstream | 252 | 1902312 ~ 1903179 (+) |
| G105152 | NA | non-coding | upstream | 11483 | 1891466 ~ 1891948 (+) |
| G105151 | NA | non-coding | upstream | 13144 | 1889923 ~ 1890287 (+) |
| G105148 | NA | non-coding | upstream | 18157 | 1884835 ~ 1885274 (+) |
| G105162 | NA | non-coding | downstream | 2606 | 1906496 ~ 1906960 (+) |
| G105123 | NA | non-coding | downstream | 8574 | 1912464 ~ 1917170 (+) |
| G105124 | NA | non-coding | downstream | 13459 | 1917349 ~ 1918041 (+) |
| G105125 | nrsn1 | non-coding | downstream | 14192 | 1918082 ~ 1922686 (+) |
| G105176 | NA | non-coding | downstream | 36296 | 1940186 ~ 1940573 (+) |
| G105042 | NA | other | upstream | 192874 | 1708969 ~ 1710557 (+) |
| G105036 | NA | other | upstream | 203000 | 1699073 ~ 1700431 (+) |
| tgfbr2b | LOC106606173 | other | upstream | 550568 | 1309202 ~ 1390936 (+) |
| G104761 | NA | other | upstream | 749682 | 1153061 ~ 1153749 (+) |
| cmc1 | cc068 | other | upstream | 1030916 | 860459 ~ 872515 (+) |
| G106019 | NA | other | downstream | 616826 | 2520716 ~ 2527972 (+) |
| G106122 | NA | other | downstream | 814071 | 2717961 ~ 2718525 (+) |
| G106240 | NA | other | downstream | 1070933 | 2974823 ~ 3039475 (+) |
| G106253 | cdkal | other | downstream | 1302907 | 3006312 ~ 3391033 (+) |
| mboat1 | LOC106573215 | other | downstream | 1463315 | 3350582 ~ 3487129 (+) |
