XLOC_020785 (CABZ01064972.1)


Basic Information

Item Value
gene id XLOC_020785
gene name CABZ01064972.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 5483588 ~ 5518117 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00040979
CCATGATAGGAAATTCCTTACTTCCCTATTCACTATAAGCAAAATTAGGAACAGAAACGCTACGGAGTGATTTTAAGTCAGTTTCAAATGTAACTAACTCAGACAAACTACCAAAGTGAAACTGTGTCAATAATATTAGCTTAGCACGTTCAAAAAGCAGTTTTAAGCAACGCACTGTACATCATCGAACAGTTTTAGAGCATCGTAACTTGAAGGACAATCTTGACCTCTCCTATTTATCCTGCAGAAATATGCGGATGTTTCTCTTTTACTTTTCGTTACTCGTAAATGGTGCTCTTGGTGTGATGCATAAAAGTCAGTCTGTGTCAGTAATGGAGGGAGATTCTGTCACTTTATACGCTGATCCTACAGAAATTCAGAAAGCTGATCTGATATTGTGGACGTTTGGACCTGACGGCACCCGAATAGCTCAGTTCAACAGAATGGATCATAAAATCTCACTATATAAAGAGATTCTTGATGGGAAATTCAGAGACAGACTGACGCTGGACAGtaaaactggatctctgaccatcacaaacACCAAAACAACAGACTCCGGACTTTACAAACTGGAGCTCATTGGCAAAAAAGACATCCCATCCATGAAGTTCAGCATTATTGTTTATGCTCATCTGCCTGTTCCTGTCCTCATCTTCAACTTTTCTCAATGTTCCTCATCTTCATCAGTGCACTATTGTTCAGTGctgtgttcagtggtgaatgtgagcgctgtgagtctctcctggaacaaaggaaacagtgtattgtccagcatcagtgtgtctgatctcagcatcagtctctctctacctctggaggtggaatatcaggatagcaacacctacagctgtgtgaTCGACAACCCCATCAGCAATCAGACCACACATCTGGACATCAGCACACTCTGTCAGCCATGTTCAGCGCCAGATTTGTCCTCTGGTTATATAGCGTTGGTGATCTGCTTTTGTGCCGTGGCTTCAGTTTTGATAATAGTTTTGTGTGGTGTTTGCTATTACTATCGTCATCATCGCAGGACGCCTAAACAAGCCAGTTATCACGaacgACCTGATGGGGAGGAATTTATTGGACTAACTAATGgtgTAGTGTCTGGGAACAGTGATCAGTCAGACAATGCAAGTGCAAAAATGAGTGATGATGAGGAGGACGGGCTAGTTGCTGATATGCTTGAGAGAGATGAAATTACCTCAGTGCCAGTGATGGTGGGACATTCGGCTACACTAAATACTGGAATCCCTGAAATCCAGCACAACGAGTTGGTCTGGTGGACGTTTGCTGAATACAGAGAAATCGGCCGCTCTCCATTTGTGGTCATCGCTGAATGggataaaacaaacaacaagcaAAACCTGTTTAATGGAGATATATTCAAAGACGTGAAGCTGAACCAGaggactggatctctgaccatcacaaaAATCACACAGAAACACTTTGGATATTATAAACTGTGCATAAACAGTGAAGGACAGAGGATCTCCAAGACGTTCAGCGTTGTTGCTAAAAACCCCTGGAAAAGAAAGTCGAGTCGAATTGAGAGGAGACAAACTTCCCCCTGATGAAGAAGGAAGAGCACACATATGATCATATAAACACTGgaatgttaaatgtttattttttcacagaTCCTACAGACAGTAGGAGCAGAATTGTTGATCAATTGCTGTTACATCCTTATTTTAATAAACTGTTTTCGCTTTTATTGTGATTGATAAATGCTGCCTGCTGTGAACCTGTGCCTAACTGGACAAATGGTTTTCTTTTACTAACTTTTGCTCATTTTACAATCAATATAACCTGCAGAAAATTACTTTTGgacagtt

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000098966

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00040979 True 1844 mRNA 0.41 9 5483588 5518117

Neighbor

gene id symbol gene type direction distance location
XLOC_020784 NA coding downstream 20473 5453243 ~ 5463115 (-)
XLOC_020783 zgc:194627 coding downstream 41695 5433093 ~ 5441893 (-)
XLOC_020782 s1pr4 coding downstream 160106 5320415 ~ 5323482 (-)
XLOC_020781 NA coding downstream 167999 5312971 ~ 5315589 (-)
XLOC_020780 NA coding downstream 208626 5267523 ~ 5274962 (-)
XLOC_020786 CABZ01064968.1 coding upstream 197 5518314 ~ 5529241 (-)
XLOC_020787 zgc:171601 coding upstream 31617 5549734 ~ 5553007 (-)
XLOC_020788 NA coding upstream 106256 5624373 ~ 5631081 (-)
XLOC_020789 mcm2 coding upstream 113912 5632029 ~ 5655680 (-)
XLOC_020790 ccdc51 coding upstream 137639 5655756 ~ 5663354 (-)
XLOC_020777 CR936300.1 non-coding downstream 338566 5140530 ~ 5145022 (-)
XLOC_020765 NA non-coding downstream 629773 4853062 ~ 4853815 (-)
XLOC_020792 NA non-coding upstream 183143 5701260 ~ 5724131 (-)
XLOC_020793 NA non-coding upstream 205211 5723328 ~ 5825199 (-)
XLOC_020795 BX005329.2 non-coding upstream 227186 5745303 ~ 5749450 (-)
XLOC_020798 NA non-coding upstream 342023 5860140 ~ 5872272 (-)

Expression


Co-expression Network