Gene
RNA
| Item | Value |
|---|---|
| gene id | G105124 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 1917349 ~ 1918041 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: protein AKNAD1, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU118400 | True | 693 | lncRNA | 0.52 | 1 | 1917349 | 1918041 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110511503 | LOC106605726 | coding | upstream | 15901 | 1865365 ~ 1901456 (+) |
| slc6a3 | slc6a3 | coding | upstream | 63779 | 1816808 ~ 1853570 (+) |
| LOC110514512 | LOC105016610 | coding | upstream | 122411 | 1745298 ~ 1794938 (+) |
| tmem42a | LOC106595323 | coding | upstream | 209674 | 1704889 ~ 1707675 (+) |
| gpd1l | LOC105023484 | coding | upstream | 218980 | 1683561 ~ 1698369 (+) |
| LOC110516539 | NA | coding | downstream | 198512 | 2116553 ~ 2120455 (+) |
| LOC118944029 | NA | coding | downstream | 248080 | 2166121 ~ 2177996 (+) |
| LOC118944030 | NA | coding | downstream | 500145 | 2418186 ~ 2420621 (+) |
| LOC118937340 | NA | coding | downstream | 1060195 | 2978236 ~ 2978524 (+) |
| LOC118937337 | NA | coding | downstream | 1060745 | 2978786 ~ 2980193 (+) |
| G105123 | NA | non-coding | upstream | 179 | 1912464 ~ 1917170 (+) |
| G105162 | NA | non-coding | upstream | 10389 | 1906496 ~ 1906960 (+) |
| G105159 | NA | non-coding | upstream | 13459 | 1903431 ~ 1903890 (+) |
| G105158 | NA | non-coding | upstream | 14170 | 1902312 ~ 1903179 (+) |
| G105125 | nrsn1 | non-coding | downstream | 41 | 1918082 ~ 1922686 (+) |
| G105176 | NA | non-coding | downstream | 22145 | 1940186 ~ 1940573 (+) |
| G105177 | NA | non-coding | downstream | 24021 | 1942062 ~ 1942281 (+) |
| G105178 | NA | non-coding | downstream | 24652 | 1942693 ~ 1942951 (+) |
| G105189 | NA | non-coding | downstream | 50341 | 1968382 ~ 1969592 (+) |
| G105042 | NA | other | upstream | 206792 | 1708969 ~ 1710557 (+) |
| G105036 | NA | other | upstream | 216918 | 1699073 ~ 1700431 (+) |
| tgfbr2b | LOC106606173 | other | upstream | 564486 | 1309202 ~ 1390936 (+) |
| G104761 | NA | other | upstream | 763600 | 1153061 ~ 1153749 (+) |
| cmc1 | cc068 | other | upstream | 1044834 | 860459 ~ 872515 (+) |
| G106019 | NA | other | downstream | 602675 | 2520716 ~ 2527972 (+) |
| G106122 | NA | other | downstream | 799920 | 2717961 ~ 2718525 (+) |
| G106240 | NA | other | downstream | 1056782 | 2974823 ~ 3039475 (+) |
| G106253 | cdkal | other | downstream | 1288756 | 3006312 ~ 3391033 (+) |
| mboat1 | LOC106573215 | other | downstream | 1449164 | 3350582 ~ 3487129 (+) |
