G105125 (nrsn1)


Basic Information

Item Value
gene id G105125
gene name nrsn1
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 1918082 ~ 1922686 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU118411
CTACGTTCTGATGAGTCTCCCCAGAAGTACCCCCTCATTTGACCAGTAGGCCTACGCTCTGATGAGTCTCCCCAGAAGTACCCCCTAATTTGACCAGTAGGCCTACGTTCTGATGAGTCTCCCCAGAAGTACCCCCTCATTTGACCAGTAGGCCTACGTTCTGGTGAGTCTCCCCAGAAGTACCCCCTCATTTGACCAGTAGGCCTACGTTCTGATGAGTCTCCCCAGAAGTACCCCCTCATTTGACCAGTAGGCCTACGTTCTGATGAGTCTCCCCAGAAGTACCCCCTCATTTGACCAGTAGGCCTACGTTCTGATGAGTCTCCCCAGAAGTACCCCCTCATTTCACCAGTAGGCCTACATTCTGATGAGTCTCCCAGAATACCCACTCATTTCACCAGTAGGCCGACGTTCTGATGAGTCTCCCAagaaccccctgtggataggataagttccccctgtggataggataagtaccccctgtggataggacAAGTTCCCCCTGTGGATAGGATAAGTACCCCATGTGGATATAATAAGTACCCCATGTGGATAGGataagtaccccctgtggataggatAAGTAACCCATGTGGATATGATaagtacccctgtggataggataagtaccccctgtggatagtaTAAGTACCCCATGTGGATAGGataagTACCCCATGTGGATAGGATAaataccccctgtggataggatAAATACCCCATGTGGACAGGATAAGTACCCCATGTGGATAGGATAAGTACCCCATGTGGATAGGATAAGTACCCCATGTGGATAGGATAAGTACCCCATGTGGATATGATAAGTACTCCTGTGGATAGGATAAGTACCCCATGTGGATAGGATAAGTACCCCATGTGGATATGATAAGTACCCCATGCAGATAGGATAAGTACCCCATGTGGATAGGATAAGTACCCCATGCGGATAGGATAAATACCCCATGTGGACAGGATAAGTACCCCATGTGGATATGACAAGTACCCCATGCGGATAGGATAAGTACCCCATGTGGATAGGATAAGTACCCCATGTGGATAGGATAAGTACCCCATGTGGATATGATAAGTACCCCATGCGGATAGGATAAGTACCCCATGTGGATAGGATAAGTACCCCATGTGGATATGATAAGTACCCCATGCGGATAGGATAAGTACCCCATGTGGATAGGATAAGTACCCCATGTGGATAGGATAATACCCCATGTGGATAGGATAAGTACCCCATGTGGATATGATAAGTACCCCATGTGGATAGGATAAGTACCCCATGTGGATAGGATAAGTACCCCATGTGGATAGGATAAGTACCCCATGTGGATAGGATAAGTACCCCATGTGGATAGGATAAGTACCCCAGGGTGAGACCCACTGCTCTATACAGTGAGTCTGTTAGTTTCTTGGTCTAGGTACATGAttgtaacccagccagtagatttACATGAAAGGAGCTGTGTGATTCCTCCTGCAGCCTTAATTACACAACGTTACATGAAAGGAGCTGTGTGATTCCTCCTGCAGCCTTAATTACACAGCGTTACATGAAAGGAGCTGTGTGAAACCTCCTGCAGCCTTAATTACACAGCGTTACATGAAAGGAGCTGTGTGATTCCTCCTGCAGCCTTAATTACACAGAGCTACATGAAAGGAGCTGTGTGATTCCTCCTGCAGCCCTGAGTGTAAGTGCTGGAAACACAGGGTTTGTAAGGAGTAGTACTAAGATGACATAAGCTGACCTTTAGAAGGGTTAGGAACAAGGACACATGAACACCACTGATAATCTACCTCTCACTACTACATTGACAACTGTTATGTCTCTGAGTTGGGCTGGACACTTTGCACTTTAGACAGGGTGACAGGGATCTTACTCTCCCCCGGAGTAGGGGCTCTGGTGACGGGATGGACCGTATTCTGGATATCAACCAGTCTCTCCTTAAACTTCTGTTGCAGGTACAGCTCCTCCTTGGAGTAGCTCTTAGAgaaggctgagaggaggagaccTACGGCCATCAGGCTGCCACCCACGCAGAACAGAACGGCGCCCGTCAGCTTGCACACGTCCAAGGCTCGGTTGAAGAGGACAGCGTGGCTGTCCACGAAGAGGAGCTCGTCTTCCCCGAATGCTTCGATCTTAGTCGGGGTGGCGTAGCCCACCAATAGGACAATGAGGCCTGTCACCAGAATCAGGGTTCCTAACGCTAGACAGacctgggggagggagagacaggatcaGGGTTCCTAACTCTAGACAGacctgggggagggagagacaggatcaGGGTTCCTAACACTAGACAGacctgggggagggagagacaggatcaGGGTTCCTAACGCTAGACAGacctgggggagggagagacaggatcaGGGTTCCTAACACTAGACAGacctgggggagggagagacaggatcaGGGTTCCTAACGCTAGACAGACctgggggagggatggatgagagacAGGATTAGGGTTCAGGATCAGGGTTCAGGGTTCCTAATGCTAGACAGacctgggggagggagagacaggatcaGGGTTCCTAACACTAGACAGACCTGAACAGGCAGATGTTTACAGTAACCTGGCTCAATACACTACCCAGACCATGTCAGGATGTTTACAGCACCATGACCCAATACCCTCCCAATATCTCTTCTCTCATATATATCATACCTTCCAGAGGACAGAGCTCCACCGACTAGGCGATCTCTGAATCTGAAAATCTTCATCGCGTTCCCAGATGGAGGCAGTACACTCCTCGTAGAACTGGTGGAGGTATGATCTGACGCCGTATCTCTGGTCGTGCTGCGTCTGTTCAGCGTAGTCTGACCCACAGATCTCAGCACAGGCTGAAGCCATCCTGACCCTTTCACCTCAGCtctgtctagagagagagagagagagagcaccacacTAACCTCACACACACCGGGTGCCACTgcctgcacacaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaaacagttttATTATGGAGAGAGATACAATGCTGAATGATCAGCCACAGTGTTGCTCCCATTTTGAATCACCCATCTGTTCCTGTTCAGGATATCAGGTTGTGTTGCAGCCTGCTACCTGTTCAGGATATTAGGTTGTGTTGCTGCCTGCTACCTGTTCAGGATATTAGGTTGTGTTGCTGCCTGCTACCTGTTACCTGTTCAGGATATTAGGTTGTGTTGCTGCCTGCTACCTGTTCA
>TU118412
CTACGTTCTGATGAGTCTCCCCAGAAGTACCCCCTCATTTGACCAGTAGGCCTACGCTCTGATGAGTCTCCCCAGAAGTACCCCCTAATTTGACCAGTAGGCCTACGTTCTGATGAGTCTCCCCAGAAGTACCCCCTCATTTGACCAGTAGGCCTACGTTCTGGTGAGTCTCCCCAGAAGTACCCCCTCATTTGACCAGTAGGCCTACGTTCTGATGAGTCTCCCCAGAAGTACCCCCTCATTTGACCAGTAGGCCTACGTTCTGATGAGTCTCCCCAGAAGTACCCCCTCATTTGACCAGTAGGCCTACGTTCTGATGAGTCTCCCCAGAAGTACCCCCTCATTTCACCAGTAGGCCTACATTCTGATGAGTCTCCCAGAATACCCACTCATTTCACCAGTAGGCCGACGTTCTGATGAGTCTCCCAagaaccccctgtggataggataagttccccctgtggataggataagtaccccctgtggataggacaagtaccccctgtggataggatAAGTACCCCTGTAGATAGGATaagtacccctgtggataggatAAGTACCCCCTGTGGATAGGataagtaccccctgtggataggatAAGTAACCACTGTGGATAGGATAAGTTCCCCCTGTGGATAGGATAAGTTCACCCTGTGGATAGGATAAGTTCCCCCTGTGGATAGGATAAGTACCCCATGTGGATATAATAAGTACCCCATGTGGATAGGataagtaccccctgtggataggatAAGTAACCCATGTGGATATGATaagtacccctgtggataggataagtaccccctgtggatagtaTAAGTACCCCATGTGGATAGGataagtaccccctgtggataggatAAGTACCCCAGTGGATAGtacaagtaccccctgtggatataATAAGTACCCCATGTGGATAGGATAAATACCCCATGTGGATAGGATAaataccccctgtggataggatAAATACCCCATGTGGACAGGATAAGTACCCCATGTGGATAGGATAAGTACCCCATGTGGATAGGATAAGTACCCCATGTGGATAGGATAAGTACCCCATGTGGATATGATAAGTACTCCTGTGGATAGGATAAGTACCCCATGTGGATAGGATAAGTACCCCATGTGGATATGATAAGTACCCCATGCGGATAGGATAAGTACCCCATGTGGATAGGATAAGTACCCCATGTGGATATGATAAGTACCCCATGCGGATAGGATAAGTACCCCATGTGGATAGGATaagtacccctgtggataggatAAACACCCCATGTGGACAGGATAAGTACCCCATGTGGATATGATAAGTACCCCATGTGGATAGGATAAGTACCCCATGTGGATAGGATAAGTACCCCATGTGGATATGATAAGTACCCCATGTGGATAGGATAAGTACCCCATGTGGATAGGATaagtacccctgtggataggatAAATACCCCATGTGGACAGGATAAGTACCCCATGTGGATATGATAAGTACCCCATGCGGATAGGATAAGTACCCCATGTGGATAGGATAAGTACCCCATGTGGATAGGATAAGTACCCCATGTGGATAGGATaagtacccctgtggataggccatgTTCCCCCTGTGGATAGGATAAGTACCCCATGTAGATAGGATAAGTACCCCATGTGGATAGGATAAGTACCCCATGTGGATATGATAAGTACCCCATGTGGATAGGATAAGTACCCCATGTGGATAGGATAAGTACCCCATGTGGATAGGATAAGTACCCCATGTGGATAGGATAAGTACCCCATGTGGATAGGATAAGTACCCCAGGGTGAGACCCACTGCTCTATACAGTGAGTCTGTTAGTTTCTTGGTCTAGGTACATGAttgtaacccagccagtagatttACATGAAAGGAGCTGTGTGATTCCTCCTGCAGCCTTAATTACACAGCGTTACATGAAAGGAGCTGTGTGAAACCTCCTGCAGCCTTAATTACACAGCGTTACATGAAAGGAGCTGTGTGATTCCTCCTGCAGCCCTGAGTGTAAGTGCTGGAAACACAGGGTTTGTAAGGAGTAGTACTAAGATGACATAAGCTGACCTTTAGAAGGGTTAGGAACAAGGACACATGAACACCACTGATAATCTACCTCTCACTACTACATTGACAACTGTTATGTCTCTGAGTTGGGCTGGACACTTTGCACTTTAGACAGGGTGACAGGGATCTTACTCTCCCCCGGAGTAGGGGCTCTGGTGACGGGATGGACCGTATTCTGGATATCAACCAGTCTCTCCTTAAACTTCTGTTGCAGGTACAGCTCCTCCTTGGAGTAGCTCTTAGAgaaggctgagaggaggagaccTACGGCCATCAGGCTGCCACCCACGCAGAACAGAACGGCGCCCGTCAGCTTGCACACGTCCAAGGCTCGGTTGAAGAGGACAGCGTGGCTGTCCACGAAGAGGAGCTCGTCTTCCCCGAATGCTTCGATCTTAGTCGGGGTGGCGTAGCCCACCAATAGGACAATGAGGCCTGTCACCAGAATCAGGGTTCCTAACGCTAGACAGacctgggggagggagagacaggatcaGGGTTCCTAACTCTAGACAGacctgggggagggagagacaggatcaGGGTTCCTAACACTAGACAGacctgggggagggagagacaggatcaGGGTTCCTAACGCTAGACAGacctgggggagggagagacaggatcaGGGTTCCTAACACTAGACAGacctgggggagggagagacaggatcaGGGTTCCTAACGCTAGACAGACctgggggagggatggatgagagacAGGATTAGGGTTCAGGATCAGGGTTCAGGGTTCCTAATGCTAGACAGacctgggggagggagagacaggatcaGGGTTCCTAACACTAGACAGACCTGAACAGGCAGATGTTTACAGTAACCTGGCTCAATACACTACCCAGACCATGTCAGGATGTTTACAGCACCATGACCCAATACCCTCCCAATATCTCTTCTCTCATATATATCATACCTTCCAGAGGACAGAGCTCCACCGACTAGGCGATCTCTGAATCTGAAAATCTTCATCGCGTTCCCAGATGGAGGCAGTACACTCCTCGTAGAACTGGTGGAGGTATGATCTGACGCCGTATCTCTGGTCGTGCTGCGTCTGTTCAGCGTAGTCTGACCCACAGATCTCAGCACAGGCTGAAGCCATCCTGACCCTTTCACCTCAGCtctgtctagagagagagagagagagagcaccacacTAACCTCACACACACCGGGTGCCACTgcctgcacacaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaaacagttttATTATGGAGAGAGATACAATGCTGAATGATCAGCCACAGTGTTGCTCCCATTTTGAATCACCCATCTGTTCCTGTTCAGGATATCAGGTTGTGTTGCAGCCTGCTACCTGTTCAGGATATTAGGTTGTGTTGCTGCCTGCTACCTGTTCAGGATATTAGGTTGTGTTGCTGCCTGCTACCTGTTACCTGTTCAGGATATTAGGTTGTGTTGCTGCCTGCTACCTGTTCA

Function

symbol description
nrsn1 Predicted to be involved in nervous system development. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in neuron projection; neuronal cell body; and transport vesicle. Is expressed in central nervous system and sensory system. Orthologous to human NRSN1 (neurensin 1).

NR:

description
neurensin-1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU118411 False 3273 lncRNA 0.40 9 1918082 1922686
TU118412 True 3608 lncRNA 0.42 6 1918082 1922686

Neighbor

gene id symbol gene type direction distance location
LOC110511503 LOC106605726 coding upstream 16634 1865365 ~ 1901456 (+)
slc6a3 slc6a3 coding upstream 64512 1816808 ~ 1853570 (+)
LOC110514512 LOC105016610 coding upstream 123144 1745298 ~ 1794938 (+)
tmem42a LOC106595323 coding upstream 210407 1704889 ~ 1707675 (+)
gpd1l LOC105023484 coding upstream 219713 1683561 ~ 1698369 (+)
LOC110516539 NA coding downstream 193867 2116553 ~ 2120455 (+)
LOC118944029 NA coding downstream 243435 2166121 ~ 2177996 (+)
LOC118944030 NA coding downstream 495500 2418186 ~ 2420621 (+)
LOC118937340 NA coding downstream 1055550 2978236 ~ 2978524 (+)
LOC118937337 NA coding downstream 1056100 2978786 ~ 2980193 (+)
G105124 NA non-coding upstream 41 1917349 ~ 1918041 (+)
G105123 NA non-coding upstream 912 1912464 ~ 1917170 (+)
G105162 NA non-coding upstream 11122 1906496 ~ 1906960 (+)
G105159 NA non-coding upstream 14192 1903431 ~ 1903890 (+)
G105158 NA non-coding upstream 14903 1902312 ~ 1903179 (+)
G105176 NA non-coding downstream 17500 1940186 ~ 1940573 (+)
G105177 NA non-coding downstream 19376 1942062 ~ 1942281 (+)
G105178 NA non-coding downstream 20007 1942693 ~ 1942951 (+)
G105189 NA non-coding downstream 45696 1968382 ~ 1969592 (+)
G105502 NA non-coding downstream 49038 1971724 ~ 1972076 (+)
G105042 NA other upstream 207525 1708969 ~ 1710557 (+)
G105036 NA other upstream 217651 1699073 ~ 1700431 (+)
tgfbr2b LOC106606173 other upstream 565219 1309202 ~ 1390936 (+)
G104761 NA other upstream 764333 1153061 ~ 1153749 (+)
cmc1 cc068 other upstream 1045567 860459 ~ 872515 (+)
G106019 NA other downstream 598030 2520716 ~ 2527972 (+)
G106122 NA other downstream 795275 2717961 ~ 2718525 (+)
G106240 NA other downstream 1052137 2974823 ~ 3039475 (+)
G106253 cdkal other downstream 1284111 3006312 ~ 3391033 (+)
mboat1 LOC106573215 other downstream 1444519 3350582 ~ 3487129 (+)

Expression


Co-expression Network