Gene
RNA
| Item | Value |
|---|---|
| gene id | G105478 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 1936646 ~ 1937308 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU118982 | True | 323 | lncRNA | 0.48 | 2 | 1936646 | 1937308 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| nrsn1 | nrsn1 | coding | downstream | 10707 | 1921010 ~ 1925939 (-) |
| zdhhc3a | zdhhc3 | coding | downstream | 204313 | 1709516 ~ 1732333 (-) |
| kiaa1143 | k1143 | coding | downstream | 231783 | 1702951 ~ 1704863 (-) |
| LOC110515405 | LOC106590999 | coding | downstream | 253157 | 1573402 ~ 1683489 (-) |
| LOC110515934 | gadl1 | coding | downstream | 479513 | 1427251 ~ 1457133 (-) |
| LOC118937333 | NA | coding | upstream | 365328 | 2302636 ~ 2303881 (-) |
| LOC118937335 | NA | coding | upstream | 492967 | 2273420 ~ 2440302 (-) |
| sox4b | sox4 | coding | upstream | 509066 | 2446374 ~ 2449761 (-) |
| LOC110512766 | LOC106593784 | coding | upstream | 576402 | 2513710 ~ 2516419 (-) |
| LOC110514306 | NA | coding | upstream | 580879 | 2518187 ~ 2519022 (-) |
| G105473 | NA | non-coding | downstream | 4467 | 1931271 ~ 1932179 (-) |
| G105472 | NA | non-coding | downstream | 8330 | 1927211 ~ 1928316 (-) |
| G105427 | NA | non-coding | downstream | 19458 | 1912592 ~ 1917188 (-) |
| G105470 | NA | non-coding | downstream | 24560 | 1911627 ~ 1912086 (-) |
| G105456 | NA | non-coding | downstream | 56362 | 1879583 ~ 1880284 (-) |
| G105489 | NA | non-coding | upstream | 15104 | 1952412 ~ 1952888 (-) |
| G105495 | NA | non-coding | upstream | 26212 | 1963520 ~ 1963850 (-) |
| G105499 | NA | non-coding | upstream | 30196 | 1967504 ~ 1969307 (-) |
| G105505 | NA | non-coding | upstream | 35374 | 1972682 ~ 1973050 (-) |
| G105574 | NA | non-coding | upstream | 51970 | 1989278 ~ 2080958 (-) |
| G105428 | NA | other | downstream | 18619 | 1917351 ~ 1918027 (-) |
| G105340 | NA | other | downstream | 294914 | 1641267 ~ 1641732 (-) |
| G105285 | NA | other | downstream | 394940 | 1540730 ~ 1541706 (-) |
| G105492 | NA | other | upstream | 21176 | 1958484 ~ 1961587 (-) |
| G105636 | NA | other | upstream | 180771 | 2118079 ~ 2120501 (-) |
| G105938 | NA | other | upstream | 425691 | 2362999 ~ 2363531 (-) |
| G106001 | NA | other | upstream | 545633 | 2482941 ~ 2483356 (-) |
| G106003 | NA | other | upstream | 546552 | 2483860 ~ 2485123 (-) |
