G105492


Basic Information

Item Value
gene id G105492
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 1958484 ~ 1961587 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU119012
caagaatgcccccgtagcactcactcacCTATAGCCATGAAATGTGTTTAAAAGGCTGCTCATGACTTACagtaacaccatcatcccagacaccctggagcCACTctaattgcactccacactgccctcacccacctggacaaaaggaatacatGTGTAATAACGaagttcattgactacagcttaacATTCAACAACACAGTACCCTataagctcatcaccaagctcaggaccctgggactgaacacctccctccctctgcaactgccCCCATCcgccccccatccacatcgatgagGTTGTAGTGGAGCGGTTCGAGAGTTTAAAGTGTCCACaacactaaggaattaacatgggcCAAAACAACAGGGCATGACAACGCCCTCTTccctctcaggaggctgaaacgaTTTGGTCATGGaccctcagatcttcaaaacgTTTactcagctgcaccatcgagagcatcttgactggtctGCATCAGcgcttggtatggaaactgcttggcatccgaccgcaaaggcgctacagagggtagtgtgtacggccaagtacatcactggggacgagttccctgccatccaggacctctatactacgccgtgtcagaggaaggcccaaacattttttaaagactCAAGCAGCCCAACCCATAGACTGatatctctgctaccgcatggcaagcagtaccagtgCACCaattctggaaccaacaggaccctgaacagcttctacccttaATCTATAAGACCTCTAAAGAAAGGCTGCTAATTAGCTAATCAAATGTCTAACCAGACTACTTGCATTGATCCATTTGCACTGGCTCACACTGCACACAcgggactctacccacacactcacacattgttacactgacacatacacacacacatacacacgctacATACGCCAACTGATACTGGTACTGCTACTCCCTGCATATAAACATGTTATTATCTCGTactcctgcacatcgactcagtacgggtactgcctgtatatagccatgttattacctcatattccctgtatatagccatgttattacctcatacccctgtatatagccatgtgaTTACCtcatattccctgtatatagccatgttattacctcatattccctgtatatagccatgttattatctcgtattccctgtatatagccatgttattacctcatattcccagtatatagccatgttattacctcgtattccctgtatatagccatgttattacctcatacccctgtatatatccatgttattacctcatattccctgtatatagccatgttattacctcgtattccctgtatatagccatgttattacctcatattccctgtatatagccatgttattacctcatatttcctgtatatagccatgttattacctcatacccctgtatatatccatgttattacctcatattccctgtatatagccatgttattacctcgtattccctgtatatagccatgttattacctcatattccctgtatatagccatgttattacctcatattccctgtatatagccatgttattacctcatattccctgtatatagccatgttattacctcatattccctgtatatagccatgttattacctcatattccctgcatatagccatgttattacctcgtacccctgcacatcgactcagtactggttctgcctgtatatagccctgttattacctcgtacccctgcacatcgactcagtactggttctgcctgtatatagccatgttattacctcgtacccctgtatatagccatgttattacctcatattccctgtatatagccatgttattacctcgtacccctgcacatcgactcagtactggttctgcctgtatatagccatgttattacctcgtacccctgtatatagccatgttattacctcatattccctgtatatagccatgttattacctcgtacccctgcacatcgactcagtactggttctgcctgtatatagccatgttattacctcatatagccatgttattacctcgtacccctgcacatcgactcagtactggttctgcctgtatatagccctgttattacctcgtacccctgcacatcgactcagtactggttctgcctgtatatagccctgttattacctcgtacccctgcacatcgactcagtactggttctgcctgtatatagccatgttattacctcgtactc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU119012 True 2225 TUCP 0.44 3 1958484 1961587

Neighbor

gene id symbol gene type direction distance location
nrsn1 nrsn1 coding downstream 32545 1921010 ~ 1925939 (-)
zdhhc3a zdhhc3 coding downstream 226151 1709516 ~ 1732333 (-)
kiaa1143 k1143 coding downstream 253621 1702951 ~ 1704863 (-)
LOC110515405 LOC106590999 coding downstream 274995 1573402 ~ 1683489 (-)
LOC110515934 gadl1 coding downstream 501351 1427251 ~ 1457133 (-)
LOC118937333 NA coding upstream 341049 2302636 ~ 2303881 (-)
LOC118937335 NA coding upstream 468688 2273420 ~ 2440302 (-)
sox4b sox4 coding upstream 484787 2446374 ~ 2449761 (-)
LOC110512766 LOC106593784 coding upstream 552123 2513710 ~ 2516419 (-)
LOC110514306 NA coding upstream 556600 2518187 ~ 2519022 (-)
G105489 NA non-coding downstream 5596 1952412 ~ 1952888 (-)
G105478 NA non-coding downstream 21176 1936646 ~ 1937308 (-)
G105473 NA non-coding downstream 26305 1931271 ~ 1932179 (-)
G105472 NA non-coding downstream 30168 1927211 ~ 1928316 (-)
G105427 NA non-coding downstream 41296 1912592 ~ 1917188 (-)
G105495 NA non-coding upstream 1933 1963520 ~ 1963850 (-)
G105499 NA non-coding upstream 5917 1967504 ~ 1969307 (-)
G105505 NA non-coding upstream 11095 1972682 ~ 1973050 (-)
G105574 NA non-coding upstream 27691 1989278 ~ 2080958 (-)
G105577 NA non-coding upstream 37009 1998596 ~ 1998853 (-)
G105428 NA other downstream 40457 1917351 ~ 1918027 (-)
G105340 NA other downstream 316752 1641267 ~ 1641732 (-)
G105285 NA other downstream 416778 1540730 ~ 1541706 (-)
G105636 NA other upstream 156492 2118079 ~ 2120501 (-)
G105938 NA other upstream 401412 2362999 ~ 2363531 (-)
G106001 NA other upstream 521354 2482941 ~ 2483356 (-)
G106003 NA other upstream 522273 2483860 ~ 2485123 (-)
LOC110506994 carmil1 other upstream 1790974 3705036 ~ 3924570 (-)

Expression


Co-expression Network