Gene
RNA
| Item | Value |
|---|---|
| gene id | G105505 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 1972682 ~ 1973050 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU119026 | True | 369 | lncRNA | 0.44 | 1 | 1972682 | 1973050 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| nrsn1 | nrsn1 | coding | downstream | 46743 | 1921010 ~ 1925939 (-) |
| zdhhc3a | zdhhc3 | coding | downstream | 240349 | 1709516 ~ 1732333 (-) |
| kiaa1143 | k1143 | coding | downstream | 267819 | 1702951 ~ 1704863 (-) |
| LOC110515405 | LOC106590999 | coding | downstream | 289193 | 1573402 ~ 1683489 (-) |
| LOC110515934 | gadl1 | coding | downstream | 515549 | 1427251 ~ 1457133 (-) |
| LOC118937333 | NA | coding | upstream | 329586 | 2302636 ~ 2303881 (-) |
| LOC118937335 | NA | coding | upstream | 457225 | 2273420 ~ 2440302 (-) |
| sox4b | sox4 | coding | upstream | 473324 | 2446374 ~ 2449761 (-) |
| LOC110512766 | LOC106593784 | coding | upstream | 540660 | 2513710 ~ 2516419 (-) |
| LOC110514306 | NA | coding | upstream | 545137 | 2518187 ~ 2519022 (-) |
| G105499 | NA | non-coding | downstream | 3375 | 1967504 ~ 1969307 (-) |
| G105495 | NA | non-coding | downstream | 8832 | 1963520 ~ 1963850 (-) |
| G105489 | NA | non-coding | downstream | 19794 | 1952412 ~ 1952888 (-) |
| G105478 | NA | non-coding | downstream | 35374 | 1936646 ~ 1937308 (-) |
| G105473 | NA | non-coding | downstream | 40503 | 1931271 ~ 1932179 (-) |
| G105574 | NA | non-coding | upstream | 16228 | 1989278 ~ 2080958 (-) |
| G105577 | NA | non-coding | upstream | 25546 | 1998596 ~ 1998853 (-) |
| G105586 | NA | non-coding | upstream | 51773 | 2024823 ~ 2025198 (-) |
| G105606 | NA | non-coding | upstream | 75641 | 2048691 ~ 2050005 (-) |
| G105613 | NA | non-coding | upstream | 86833 | 2059883 ~ 2060652 (-) |
| G105492 | NA | other | downstream | 11095 | 1958484 ~ 1961587 (-) |
| G105428 | NA | other | downstream | 54655 | 1917351 ~ 1918027 (-) |
| G105427 | NA | other | downstream | 55687 | 1912592 ~ 1917188 (-) |
| G105340 | NA | other | downstream | 330950 | 1641267 ~ 1641732 (-) |
| G105636 | NA | other | upstream | 145029 | 2118079 ~ 2120501 (-) |
| G105938 | NA | other | upstream | 389949 | 2362999 ~ 2363531 (-) |
| G106001 | NA | other | upstream | 509891 | 2482941 ~ 2483356 (-) |
| G106003 | NA | other | upstream | 510810 | 2483860 ~ 2485123 (-) |
| LOC110506994 | carmil1 | other | upstream | 1779511 | 3705036 ~ 3924570 (-) |
