G105504


Basic Information

Item Value
gene id G105504
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 1972750 ~ 1973129 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU119025
TGAGTCAGTCTCTAGTGTTCAGTCTGAAACACACTCCTCTTTGAGACAGTCTCTAGTGTTCAGTCTGAAACACACTCCTCTTTGAGACAGTCTCTAGTGTTCAGTCTGAAACACACTCCTCTTTGAGTCAGTCTCTAATGTTCAGTCTGAAACACAACTCTGAGTCAGTCTCTAGTGTTCAGTCTGAAACACACTCCTCTTTGAGTCAGTCTCTAGTGTTCAGTCTGAAACACACTCCTCTTTGAGTCAGTCTCTAGTGTTCAGTCTGAAACACACTCCTCTTTGAGTCAGTCTCTAGTGTTCAGTCTGAAACACACTCCTCTTTGAGTCAATCTCTAGTGTTCAGTCTGAAACACACTCCTCTTTGAGTCAGTCTCTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU119025 True 380 lncRNA 0.43 1 1972750 1973129

Neighbor

gene id symbol gene type direction distance location
LOC110511503 LOC106605726 coding upstream 71302 1865365 ~ 1901456 (+)
slc6a3 slc6a3 coding upstream 119180 1816808 ~ 1853570 (+)
LOC110514512 LOC105016610 coding upstream 177812 1745298 ~ 1794938 (+)
tmem42a LOC106595323 coding upstream 265075 1704889 ~ 1707675 (+)
gpd1l LOC105023484 coding upstream 274381 1683561 ~ 1698369 (+)
LOC110516539 NA coding downstream 143424 2116553 ~ 2120455 (+)
LOC118944029 NA coding downstream 192992 2166121 ~ 2177996 (+)
LOC118944030 NA coding downstream 445057 2418186 ~ 2420621 (+)
LOC118937340 NA coding downstream 1005107 2978236 ~ 2978524 (+)
LOC118937337 NA coding downstream 1005657 2978786 ~ 2980193 (+)
G105502 NA non-coding upstream 674 1971724 ~ 1972076 (+)
G105189 NA non-coding upstream 3158 1968382 ~ 1969592 (+)
G105178 NA non-coding upstream 29799 1942693 ~ 1942951 (+)
G105177 NA non-coding upstream 30469 1942062 ~ 1942281 (+)
G105176 NA non-coding upstream 32177 1940186 ~ 1940573 (+)
G105518 NA non-coding downstream 14618 1987747 ~ 1988168 (+)
G105525 NA non-coding downstream 28860 2001989 ~ 2002531 (+)
G105527 NA non-coding downstream 33332 2006461 ~ 2007221 (+)
G105529 NA non-coding downstream 42948 2016077 ~ 2018117 (+)
G105536 NA non-coding downstream 55636 2028765 ~ 2029966 (+)
G105042 NA other upstream 262193 1708969 ~ 1710557 (+)
G105036 NA other upstream 272319 1699073 ~ 1700431 (+)
tgfbr2b LOC106606173 other upstream 619887 1309202 ~ 1390936 (+)
G104761 NA other upstream 819001 1153061 ~ 1153749 (+)
cmc1 cc068 other upstream 1100235 860459 ~ 872515 (+)
G106019 NA other downstream 547587 2520716 ~ 2527972 (+)
G106122 NA other downstream 744832 2717961 ~ 2718525 (+)
G106240 NA other downstream 1001694 2974823 ~ 3039475 (+)
G106253 cdkal other downstream 1233668 3006312 ~ 3391033 (+)
mboat1 LOC106573215 other downstream 1394076 3350582 ~ 3487129 (+)

Expression


Co-expression Network