G105536


Basic Information

Item Value
gene id G105536
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 2028765 ~ 2029966 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU119065
acaaaataggaaaaatgccaagggggtgaatactttcacaagccattGTATGACCTTATTGTATTTCCTGATTGCTAACAGTTCCTCAGATTACTACGGTGATAGTTCCTCAGGTTACTACGGTGATAGTTCCTCAGATTACTACACTGATAGTTCCTCAGATTACTACGGCGATAGTTCCTCAGGTTACTACACTGATAGTTCCTCAGATTACTACGGTGATAGTTCCTCAGATTACTACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU119065 True 242 lncRNA 0.56 2 2028765 2029966

Neighbor

gene id symbol gene type direction distance location
LOC110511503 LOC106605726 coding upstream 127317 1865365 ~ 1901456 (+)
slc6a3 slc6a3 coding upstream 175195 1816808 ~ 1853570 (+)
LOC110514512 LOC105016610 coding upstream 233827 1745298 ~ 1794938 (+)
tmem42a LOC106595323 coding upstream 321090 1704889 ~ 1707675 (+)
gpd1l LOC105023484 coding upstream 330396 1683561 ~ 1698369 (+)
LOC110516539 NA coding downstream 86587 2116553 ~ 2120455 (+)
LOC118944029 NA coding downstream 136155 2166121 ~ 2177996 (+)
LOC118944030 NA coding downstream 388220 2418186 ~ 2420621 (+)
LOC118937340 NA coding downstream 948270 2978236 ~ 2978524 (+)
LOC118937337 NA coding downstream 948820 2978786 ~ 2980193 (+)
G105529 NA non-coding upstream 10648 2016077 ~ 2018117 (+)
G105527 NA non-coding upstream 21544 2006461 ~ 2007221 (+)
G105525 NA non-coding upstream 26234 2001989 ~ 2002531 (+)
G105518 NA non-coding upstream 40597 1987747 ~ 1988168 (+)
G105504 NA non-coding upstream 55636 1972750 ~ 1973129 (+)
G105548 NA non-coding downstream 18715 2048681 ~ 2050314 (+)
G105556 NA non-coding downstream 35171 2065137 ~ 2066926 (+)
G105571 NA non-coding downstream 70989 2100955 ~ 2101640 (+)
G105572 NA non-coding downstream 73415 2103381 ~ 2107628 (+)
G105639 NA non-coding downstream 93529 2123495 ~ 2124035 (+)
G105042 NA other upstream 318208 1708969 ~ 1710557 (+)
G105036 NA other upstream 328334 1699073 ~ 1700431 (+)
tgfbr2b LOC106606173 other upstream 675902 1309202 ~ 1390936 (+)
G104761 NA other upstream 875016 1153061 ~ 1153749 (+)
cmc1 cc068 other upstream 1156250 860459 ~ 872515 (+)
G106019 NA other downstream 490750 2520716 ~ 2527972 (+)
G106122 NA other downstream 687995 2717961 ~ 2718525 (+)
G106240 NA other downstream 944857 2974823 ~ 3039475 (+)
G106253 cdkal other downstream 1176831 3006312 ~ 3391033 (+)
mboat1 LOC106573215 other downstream 1337239 3350582 ~ 3487129 (+)

Expression


Co-expression Network