G105613



Basic Information


Item Value
gene id G105613
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 2059883 ~ 2060652 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU119184
ATGGTCACACCAGAGCTGTAGATTACCGACACTAGATCCAGGTATTTATACTGTAGGAATCCATTTGGATAACGCACAGCAAATCGTAGTTTGACTTTAAACCCATTGAAACATAACCCATGTTATTTTCTTCATCACGGAGACTTACATGTTGTGGCACGTATTGAATAGGTGGCGTTGAGGAAATGCGTGCGAGTAACAGAATCAATGGTGAAGTACAGTTTTCCAAAGGGAGCACAATGCAACCATGTCAGCCGGCTGTGTTGACATGGGCCGTTTTGTTATTGTTGCTGCCATGGTTGAATGATGCATTCATATAGACGTCCTTCATAACATAACAGACAATACAAGGTTGGTGTGATTTATCTGACATGGCTTTGATTCATGCTTTCTGAGAGAGGAGTTGATCCTTCATTAAACCACTTGGAACTAAACTAAAGGGTTAATTGTTTAAGCTCAACATGCAACAAAACTAAATGGTTAATTGTTTAAGCTCAACATGCAACTAAACTAAAGGGCTAACTGTTTAAGCTCAACATGCAACAAAACTAAATGGTTAATTGTTTAAGCTCAACATGCAACAAAACTAAATGGTTAATTGTTTAAGCTCAACATGCAACAAAACTAAATGGTTAATTGTTTAAGCTCAACATGCA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU119184 True 656 lncRNA 0.38 2 2059883 2060652

Neighbor


gene id symbol gene type direction distance location
nrsn1 nrsn1 coding downstream 133944 1921010 ~ 1925939 (-)
zdhhc3a zdhhc3 coding downstream 327550 1709516 ~ 1732333 (-)
kiaa1143 k1143 coding downstream 355020 1702951 ~ 1704863 (-)
LOC110515405 LOC106590999 coding downstream 376394 1573402 ~ 1683489 (-)
LOC110515934 gadl1 coding downstream 602750 1427251 ~ 1457133 (-)
LOC118937333 NA coding upstream 241984 2302636 ~ 2303881 (-)
LOC118937335 NA coding upstream 369623 2273420 ~ 2440302 (-)
sox4b sox4 coding upstream 385722 2446374 ~ 2449761 (-)
LOC110512766 LOC106593784 coding upstream 453058 2513710 ~ 2516419 (-)
LOC110514306 NA coding upstream 457535 2518187 ~ 2519022 (-)
G105606 NA non-coding downstream 9878 2048691 ~ 2050005 (-)
G105586 NA non-coding downstream 34685 2024823 ~ 2025198 (-)
G105577 NA non-coding downstream 61030 1998596 ~ 1998853 (-)
G105505 NA non-coding downstream 86833 1972682 ~ 1973050 (-)
G105499 NA non-coding downstream 90576 1967504 ~ 1969307 (-)
G105622 NA non-coding upstream 10067 2070719 ~ 2071551 (-)
G105626 NA non-coding upstream 31815 2092467 ~ 2093474 (-)
G105629 NA non-coding upstream 44014 2104666 ~ 2108959 (-)
G105636 NA non-coding upstream 57427 2118079 ~ 2120501 (-)
G105638 NA non-coding upstream 60584 2121236 ~ 2121464 (-)
G105492 NA other downstream 98296 1958484 ~ 1961587 (-)
G105428 NA other downstream 141856 1917351 ~ 1918027 (-)
G105427 NA other downstream 142888 1912592 ~ 1917188 (-)
G105340 NA other downstream 418151 1641267 ~ 1641732 (-)
G105938 NA other upstream 302347 2362999 ~ 2363531 (-)
G106001 NA other upstream 422289 2482941 ~ 2483356 (-)
G106003 NA other upstream 423208 2483860 ~ 2485123 (-)
LOC110506994 carmil1 other upstream 1691909 3705036 ~ 3924570 (-)

Expression



Co-expression Network