G105629



Basic Information


Item Value
gene id G105629
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 2104666 ~ 2108959 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU119202
TTTACAAAGAGAAATAAAACCCATTCAGACGACCTGAAGACAGTTCAATAGTAAAGCTGTCTTTTACTGTATTTCCCCTTGGAGAGACATGTTAATTGGGCTACAATATGAGGGGTTTTCTATTAGCCCAGGACTAGAGCAAGACACGttcagagagaaaacagggaATTCAGTAGTGTTATGTGAAAAACGATTGCTCTACAGGGGGCTCTTCAATAATGTAAACAAAC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU119202 True 230 lncRNA 0.39 2 2104666 2108959

Neighbor


gene id symbol gene type direction distance location
nrsn1 nrsn1 coding downstream 178727 1921010 ~ 1925939 (-)
zdhhc3a zdhhc3 coding downstream 372333 1709516 ~ 1732333 (-)
kiaa1143 k1143 coding downstream 399803 1702951 ~ 1704863 (-)
LOC110515405 LOC106590999 coding downstream 421177 1573402 ~ 1683489 (-)
LOC110515934 gadl1 coding downstream 647533 1427251 ~ 1457133 (-)
LOC118937333 NA coding upstream 193677 2302636 ~ 2303881 (-)
LOC118937335 NA coding upstream 321316 2273420 ~ 2440302 (-)
sox4b sox4 coding upstream 337415 2446374 ~ 2449761 (-)
LOC110512766 LOC106593784 coding upstream 404751 2513710 ~ 2516419 (-)
LOC110514306 NA coding upstream 409228 2518187 ~ 2519022 (-)
G105626 NA non-coding downstream 11192 2092467 ~ 2093474 (-)
G105574 NA non-coding downstream 23708 1989278 ~ 2080958 (-)
G105622 NA non-coding downstream 33115 2070719 ~ 2071551 (-)
G105613 NA non-coding downstream 44014 2059883 ~ 2060652 (-)
G105606 NA non-coding downstream 54661 2048691 ~ 2050005 (-)
G105636 NA non-coding upstream 9120 2118079 ~ 2120501 (-)
G105638 NA non-coding upstream 12277 2121236 ~ 2121464 (-)
G105640 NA non-coding upstream 17821 2126780 ~ 2127108 (-)
G105641 NA non-coding upstream 21151 2130110 ~ 2130359 (-)
G105643 NA non-coding upstream 25288 2134247 ~ 2134450 (-)
G105492 NA other downstream 143079 1958484 ~ 1961587 (-)
G105428 NA other downstream 186639 1917351 ~ 1918027 (-)
G105427 NA other downstream 187671 1912592 ~ 1917188 (-)
G105340 NA other downstream 462934 1641267 ~ 1641732 (-)
G105938 NA other upstream 254040 2362999 ~ 2363531 (-)
G106001 NA other upstream 373982 2482941 ~ 2483356 (-)
G106003 NA other upstream 374901 2483860 ~ 2485123 (-)
LOC110506994 carmil1 other upstream 1643602 3705036 ~ 3924570 (-)

Expression



Co-expression Network