Gene
RNA
| Item | Value |
|---|---|
| gene id | G105640 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 2126780 ~ 2127108 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC105896272 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU119228 | True | 329 | lncRNA | 0.41 | 1 | 2126780 | 2127108 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| nrsn1 | nrsn1 | coding | downstream | 200841 | 1921010 ~ 1925939 (-) |
| zdhhc3a | zdhhc3 | coding | downstream | 394447 | 1709516 ~ 1732333 (-) |
| kiaa1143 | k1143 | coding | downstream | 421917 | 1702951 ~ 1704863 (-) |
| LOC110515405 | LOC106590999 | coding | downstream | 443291 | 1573402 ~ 1683489 (-) |
| LOC110515934 | gadl1 | coding | downstream | 669647 | 1427251 ~ 1457133 (-) |
| LOC118937333 | NA | coding | upstream | 175528 | 2302636 ~ 2303881 (-) |
| LOC118937335 | NA | coding | upstream | 303167 | 2273420 ~ 2440302 (-) |
| sox4b | sox4 | coding | upstream | 319266 | 2446374 ~ 2449761 (-) |
| LOC110512766 | LOC106593784 | coding | upstream | 386602 | 2513710 ~ 2516419 (-) |
| LOC110514306 | NA | coding | upstream | 391079 | 2518187 ~ 2519022 (-) |
| G105638 | NA | non-coding | downstream | 5316 | 2121236 ~ 2121464 (-) |
| G105636 | NA | non-coding | downstream | 6279 | 2118079 ~ 2120501 (-) |
| G105629 | NA | non-coding | downstream | 17821 | 2104666 ~ 2108959 (-) |
| G105626 | NA | non-coding | downstream | 33306 | 2092467 ~ 2093474 (-) |
| G105622 | NA | non-coding | downstream | 55229 | 2070719 ~ 2071551 (-) |
| G105641 | NA | non-coding | upstream | 3002 | 2130110 ~ 2130359 (-) |
| G105643 | NA | non-coding | upstream | 7139 | 2134247 ~ 2134450 (-) |
| G105656 | NA | non-coding | upstream | 21790 | 2148898 ~ 2149330 (-) |
| G105707 | NA | non-coding | upstream | 39998 | 2167106 ~ 2168903 (-) |
| G105709 | NA | non-coding | upstream | 43436 | 2170544 ~ 2171057 (-) |
| G105492 | NA | other | downstream | 165193 | 1958484 ~ 1961587 (-) |
| G105428 | NA | other | downstream | 208753 | 1917351 ~ 1918027 (-) |
| G105427 | NA | other | downstream | 209785 | 1912592 ~ 1917188 (-) |
| G105340 | NA | other | downstream | 485048 | 1641267 ~ 1641732 (-) |
| G105938 | NA | other | upstream | 235891 | 2362999 ~ 2363531 (-) |
| G106001 | NA | other | upstream | 355833 | 2482941 ~ 2483356 (-) |
| G106003 | NA | other | upstream | 356752 | 2483860 ~ 2485123 (-) |
| LOC110506994 | carmil1 | other | upstream | 1625453 | 3705036 ~ 3924570 (-) |
| G107456 | NA | other | upstream | 1864218 | 3991326 ~ 3992847 (-) |
