G105643



Basic Information


Item Value
gene id G105643
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 2134247 ~ 2134450 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU119231
tcctggtacctgtcaggggtcatagagagagaccagtctcctggtacctgtcagggtcatagagagagaccagtctcctagtacctgtcaggggtcatagagagagaccagtctcctggtacctgtcaggggtcatagagagaggacatggatggTGCTGACTTCAGACCAGTCTCCTGTTACCTGtcagggtcatagagagag

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU119231 True 204 lncRNA 0.33 1 2134247 2134450

Neighbor


gene id symbol gene type direction distance location
nrsn1 nrsn1 coding downstream 208308 1921010 ~ 1925939 (-)
zdhhc3a zdhhc3 coding downstream 401914 1709516 ~ 1732333 (-)
kiaa1143 k1143 coding downstream 429384 1702951 ~ 1704863 (-)
LOC110515405 LOC106590999 coding downstream 450758 1573402 ~ 1683489 (-)
LOC110515934 gadl1 coding downstream 677114 1427251 ~ 1457133 (-)
LOC118937333 NA coding upstream 168186 2302636 ~ 2303881 (-)
LOC118937335 NA coding upstream 295825 2273420 ~ 2440302 (-)
sox4b sox4 coding upstream 311924 2446374 ~ 2449761 (-)
LOC110512766 LOC106593784 coding upstream 379260 2513710 ~ 2516419 (-)
LOC110514306 NA coding upstream 383737 2518187 ~ 2519022 (-)
G105641 NA non-coding downstream 3888 2130110 ~ 2130359 (-)
G105640 NA non-coding downstream 7139 2126780 ~ 2127108 (-)
G105638 NA non-coding downstream 12783 2121236 ~ 2121464 (-)
G105636 NA non-coding downstream 13746 2118079 ~ 2120501 (-)
G105629 NA non-coding downstream 25288 2104666 ~ 2108959 (-)
G105656 NA non-coding upstream 14448 2148898 ~ 2149330 (-)
G105707 NA non-coding upstream 32656 2167106 ~ 2168903 (-)
G105709 NA non-coding upstream 36094 2170544 ~ 2171057 (-)
G105722 NA non-coding upstream 72149 2206599 ~ 2207367 (-)
G105729 NA non-coding upstream 83567 2218017 ~ 2218225 (-)
G105492 NA other downstream 172660 1958484 ~ 1961587 (-)
G105428 NA other downstream 216220 1917351 ~ 1918027 (-)
G105427 NA other downstream 217252 1912592 ~ 1917188 (-)
G105340 NA other downstream 492515 1641267 ~ 1641732 (-)
G105938 NA other upstream 228549 2362999 ~ 2363531 (-)
G106001 NA other upstream 348491 2482941 ~ 2483356 (-)
G106003 NA other upstream 349410 2483860 ~ 2485123 (-)
LOC110506994 carmil1 other upstream 1618111 3705036 ~ 3924570 (-)
G107456 NA other upstream 1856876 3991326 ~ 3992847 (-)

Expression



Co-expression Network