G105672


Basic Information

Item Value
gene id G105672
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 2160815 ~ 2161029 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU119264
gagtccacctgtggtcaattcaattgattagacattatttagaaaggcacacacctgtctatacaaggtcccacagttgacagtgcatgtcagagaaaaaaccaagccatgaggtcaaaggaattgtctgtagagctccgagacaggattgtgtcgaggcacaaatctggggatgGGTAGCAAAATATTTCtccagcattgaagttccccaagaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU119264 True 215 lncRNA 0.37 1 2160815 2161029

Neighbor

gene id symbol gene type direction distance location
LOC110516539 NA coding upstream 40360 2116553 ~ 2120455 (+)
LOC110511503 LOC106605726 coding upstream 259367 1865365 ~ 1901456 (+)
slc6a3 slc6a3 coding upstream 307245 1816808 ~ 1853570 (+)
LOC110514512 LOC105016610 coding upstream 365877 1745298 ~ 1794938 (+)
tmem42a LOC106595323 coding upstream 453140 1704889 ~ 1707675 (+)
LOC118944029 NA coding downstream 5092 2166121 ~ 2177996 (+)
LOC118944030 NA coding downstream 257157 2418186 ~ 2420621 (+)
LOC118937340 NA coding downstream 817207 2978236 ~ 2978524 (+)
LOC118937337 NA coding downstream 817757 2978786 ~ 2980193 (+)
mboat1 LOC106573215 coding downstream 1246158 3350582 ~ 3487129 (+)
G105670 NA non-coding upstream 328 2159572 ~ 2160487 (+)
G105654 NA non-coding upstream 12104 2148466 ~ 2148711 (+)
G105642 NA non-coding upstream 27194 2132755 ~ 2133621 (+)
G105639 NA non-coding upstream 36780 2123495 ~ 2124035 (+)
G105572 NA non-coding upstream 53187 2103381 ~ 2107628 (+)
G105673 NA non-coding downstream 366 2161395 ~ 2163040 (+)
G105683 NA non-coding downstream 23019 2184048 ~ 2191289 (+)
G105694 NA non-coding downstream 51294 2212323 ~ 2213776 (+)
G105700 NA non-coding downstream 62170 2223199 ~ 2223419 (+)
G105702 NA non-coding downstream 64689 2225718 ~ 2226088 (+)
G105042 NA other upstream 450258 1708969 ~ 1710557 (+)
G105036 NA other upstream 460384 1699073 ~ 1700431 (+)
tgfbr2b LOC106606173 other upstream 807952 1309202 ~ 1390936 (+)
G104761 NA other upstream 1007066 1153061 ~ 1153749 (+)
cmc1 cc068 other upstream 1288300 860459 ~ 872515 (+)
G106019 NA other downstream 359687 2520716 ~ 2527972 (+)
G106122 NA other downstream 556932 2717961 ~ 2718525 (+)
G106240 NA other downstream 813794 2974823 ~ 3039475 (+)
G106253 cdkal other downstream 1045768 3006312 ~ 3391033 (+)

Expression


Co-expression Network