G105683


Basic Information

Item Value
gene id G105683
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 2184048 ~ 2191289 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU119281
gtacagtagtagatatgaacagacTACAGGGACCCAGTCTGGTAACTCTACATTAACACAACAGACTACAGGGACCCAGTCTGGTAACTCTACATTAACACAACAGACTACAGGGACCCAGTCTGATAACTCTACATTAACACAACAGACTACAGAGACCCAGTCTGATAACTCTACATTAACACAACAGACTACAGAGACCCAGTCTGGTAACTCTACATTAACACAACAGACTACAGAGACCCAGTCTGGTAACTCTACATTAACACAACAGACTAATTCATGTTTAGCTCCATAGGGAATCTATAGAACCCAACAGACTAATTCATGTTTAGCTCCATAGAGAACCTATAGAACCCAACAGACTAATTCATGTTTAGCTCCATAGAGAACCTATAG

Function

NR:

description
uncharacterized protein LOC110516371, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU119281 True 399 lncRNA 0.41 3 2184048 2191289

Neighbor

gene id symbol gene type direction distance location
LOC118944029 NA coding upstream 6052 2166121 ~ 2177996 (+)
LOC110516539 NA coding upstream 63593 2116553 ~ 2120455 (+)
LOC110511503 LOC106605726 coding upstream 282600 1865365 ~ 1901456 (+)
slc6a3 slc6a3 coding upstream 330478 1816808 ~ 1853570 (+)
LOC110514512 LOC105016610 coding upstream 389110 1745298 ~ 1794938 (+)
LOC118944030 NA coding downstream 226897 2418186 ~ 2420621 (+)
LOC118937340 NA coding downstream 786947 2978236 ~ 2978524 (+)
LOC118937337 NA coding downstream 787497 2978786 ~ 2980193 (+)
mboat1 LOC106573215 coding downstream 1215898 3350582 ~ 3487129 (+)
colec10 LOC106591867 coding downstream 1859494 4050783 ~ 4065607 (+)
G105673 NA non-coding upstream 21008 2161395 ~ 2163040 (+)
G105672 NA non-coding upstream 23019 2160815 ~ 2161029 (+)
G105670 NA non-coding upstream 23561 2159572 ~ 2160487 (+)
G105654 NA non-coding upstream 35337 2148466 ~ 2148711 (+)
G105642 NA non-coding upstream 50427 2132755 ~ 2133621 (+)
G105694 NA non-coding downstream 21034 2212323 ~ 2213776 (+)
G105700 NA non-coding downstream 31910 2223199 ~ 2223419 (+)
G105702 NA non-coding downstream 34429 2225718 ~ 2226088 (+)
G105704 NA non-coding downstream 36181 2227470 ~ 2227727 (+)
G105738 NA non-coding downstream 41514 2232803 ~ 2233739 (+)
G105042 NA other upstream 473491 1708969 ~ 1710557 (+)
G105036 NA other upstream 483617 1699073 ~ 1700431 (+)
tgfbr2b LOC106606173 other upstream 831185 1309202 ~ 1390936 (+)
G104761 NA other upstream 1030299 1153061 ~ 1153749 (+)
cmc1 cc068 other upstream 1311533 860459 ~ 872515 (+)
G106019 NA other downstream 329427 2520716 ~ 2527972 (+)
G106122 NA other downstream 526672 2717961 ~ 2718525 (+)
G106240 NA other downstream 783534 2974823 ~ 3039475 (+)
G106253 cdkal other downstream 1015508 3006312 ~ 3391033 (+)

Expression


Co-expression Network